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  1. Content type: Correspondence

    Recently, Oberle et al. published a paper in Retrovirology evaluating the question of whether selection plays a role in HIV transmission. The Oberle study found no obvious genotypic or phenotypic differences betw...

    Authors: Mileidy Gonzalez, Anthony L. DeVico and John L. Spouge

    Citation: Retrovirology 2017 14:13

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  2. Content type: Research

    Characterizing HIV-1 transmission networks can be important in understanding the evolutionary patterns and geospatial spread of the epidemic. We reconstructed the broad molecular epidemiology of HIV from indiv...

    Authors: Antoine Chaillon, Asma Essat, Pierre Frange, Davey M. Smith, Constance Delaugerre, Francis Barin, Jade Ghosn, Gilles Pialoux, Olivier Robineau, Christine Rouzioux, Cécile Goujard, Laurence Meyer and Marie-Laure Chaix

    Citation: Retrovirology 2017 14:15

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  3. Content type: Research

    A20-binding inhibitor of NF-κB activation (ABIN1), an important immune regulator, was previously shown to be involved in HIV-1 replication. However, the reported studies done with overexpressed ABIN1 provided ...

    Authors: Shiyou Chen, Xiaodan Yang, Weijia Cheng, Yuhong Ma, Yafang Shang, Liu Cao, Shuliang Chen, Yu Chen, Min Wang and Deyin Guo

    Citation: Retrovirology 2017 14:12

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  4. Content type: Research

    The foamy viral genome encodes four central purine-rich elements localized in the integrase-coding region of pol. Previously, we have shown that the first two of these RNA elements (A and B) are required for prot...

    Authors: Rebecca Moschall, Sarah Denk, Steffen Erkelenz, Christian Schenk, Heiner Schaal and Jochen Bodem

    Citation: Retrovirology 2017 14:10

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  5. Content type: Research

    Multiple toll-like receptors (TLRs) are expressed in cells of the monocytic lineage, including microglia, which constitute the major reservoir for human immunodeficiency virus (HIV) infection in the brain. We ...

    Authors: David Alvarez-Carbonell, Yoelvis Garcia-Mesa, Stephanie Milne, Biswajit Das, Curtis Dobrowolski, Roxana Rojas and Jonathan Karn

    Citation: Retrovirology 2017 14:9

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  6. Content type: Research

    In the Friend retrovirus mouse model we developed potent adenovirus-based vaccines that were designed to induce either strong Friend virus GagL85–93-specific CD8+ T cell or antibody responses, respectively. To op...

    Authors: Meike Kaulfuß, Ina Wensing, Sonja Windmann, Camilla Patrizia Hrycak and Wibke Bayer

    Citation: Retrovirology 2017 14:8

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  7. Content type: Research

    HIV-1 replication is critically dependent upon controlled processing of its RNA and the activities provided by its encoded regulatory factors Tat and Rev. A screen of small molecule modulators of RNA processin...

    Authors: Ahalya Balachandran, Raymond Wong, Peter Stoilov, Sandy Pan, Benjamin Blencowe, Peter Cheung, P. Richard Harrigan and Alan Cochrane

    Citation: Retrovirology 2017 14:7

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  8. Content type: Research

    Mother-to-child transmission of human immunodeficiency virus-type 1 (HIV-1) poses a serious health threat in developing countries, and adequate interventions are as yet unrealized. HIV-1 infection is frequentl...

    Authors: Kyle J. Nakamura, Laura Heath, Edwin R. Sobrera, Thomas A. Wilkinson, Katherine Semrau, Chipepo Kankasa, Nicole H. Tobin, Nicholas E. Webb, Benhur Lee, Donald M. Thea, Louise Kuhn, James I. Mullins and Grace M. Aldrovandi

    Citation: Retrovirology 2017 14:6

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  9. Content type: Research

    HIV-1 hijacks host cell machinery to ensure successful replication, including cytoskeletal components for intracellular trafficking, nucleoproteins for pre-integration complex import, and the ESCRT pathway for...

    Authors: Mark B. Lucera, Zach Fleissner, Caroline O. Tabler, Daniela M. Schlatzer, Zach Troyer and John C. Tilton

    Citation: Retrovirology 2017 14:4

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  10. Content type: Research

    Jaagsiekte sheep retrovirus (JSRV) causes a contagious lung cancer in sheep and goats that can be transmitted by aerosols produced by infected animals. Virus entry into cells is initiated by binding of the vir...

    Authors: A. Dusty Miller, Marcelo De las Heras, Jingyou Yu, Fushun Zhang, Shan-Lu Liu, Andrew E. Vaughan, Thomas L. Vaughan, Raul Rosadio, Stefano Rocca, Giuseppe Palmieri, James J. Goedert, Junya Fujimoto and Ignacio I. Wistuba

    Citation: Retrovirology 2017 14:3

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  11. Content type: Research

    Assessing the location and frequency of HIV integration sites in latently infected cells can potentially inform our understanding of how HIV persists during combination antiretroviral therapy. We developed a n...

    Authors: Jori Symons, Abha Chopra, Eva Malatinkova, Ward De Spiegelaere, Shay Leary, Don Cooper, Chike O. Abana, Ajantha Rhodes, Simin D. Rezaei, Linos Vandekerckhove, Simon Mallal, Sharon R. Lewin and Paul U. Cameron

    Citation: Retrovirology 2017 14:2

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    The Erratum to this article has been published in Retrovirology 2017 14:23

  12. Content type: Research

    Due to the prevalence of HIV-1 group M and the endemicity of HIV-1 group O infections in Cameroon, patients may be infected with both viruses and/or with HIV-1/MO recombinant forms. Such atypical infections m...

    Authors: Fabienne De Oliveira, Thomas Mourez, Aurélia Vessiere, Paul-Alain Ngoupo, Elodie Alessandri-Gradt, François Simon, Dominique Rousset and Jean-Christophe Plantier

    Citation: Retrovirology 2017 14:1

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  13. Content type: Research

    The nucleocapsid (NC) domain of HIV-1 Gag is responsible for specific recognition and packaging of genomic RNA (gRNA) into new viral particles. This occurs through specific interactions between the Gag NC doma...

    Authors: Klara Post, Erik D. Olson, M. Nabuan Naufer, Robert J. Gorelick, Ioulia Rouzina, Mark C. Williams, Karin Musier-Forsyth and Judith G. Levin

    Citation: Retrovirology 2016 13:89

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  14. Content type: Research

    Despite the durable viral suppression afforded by antiretroviral therapy, HIV-1 eradication will require strategies to target latently infected cells that persist in infected individuals. Protein kinase C (PKC...

    Authors: Adam M. Spivak, Erin T. Larragoite, McKenna L. Coletti, Amanda B. Macedo, Laura J. Martins, Alberto Bosque and Vicente Planelles

    Citation: Retrovirology 2016 13:88

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  15. Content type: Research

    Although next generation sequencing (NGS) offers the potential for studying virus populations in unprecedented depth, PCR error, amplification bias and recombination during library construction have limited it...

    Authors: Valerie F. Boltz, Jason Rausch, Wei Shao, Junko Hattori, Brian Luke, Frank Maldarelli, John W. Mellors, Mary F. Kearney and John M. Coffin

    Citation: Retrovirology 2016 13:87

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  16. Content type: Review

    Current antiretroviral therapies have improved the duration and quality of life of people living with HIV-1. However, viral reservoirs impede complete eradication of the virus. Although there are many strategi...

    Authors: Abraham Joseph Kandathil, Sho Sugawara and Ashwin Balagopal

    Citation: Retrovirology 2016 13:86

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    The Erratum to this article has been published in Retrovirology 2017 14:11

  17. Content type: Research

    CCR5-coreceptor antagonists can be used for treating HIV-2 infected individuals. Before initiating treatment with coreceptor antagonists, viral coreceptor usage should be determined to ensure that the virus ca...

    Authors: Matthias Döring, Pedro Borrego, Joachim Büch, Andreia Martins, Georg Friedrich, Ricardo Jorge Camacho, Josef Eberle, Rolf Kaiser, Thomas Lengauer, Nuno Taveira and Nico Pfeifer

    Citation: Retrovirology 2016 13:85

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  18. Content type: Short report

    The replication of HBV involves the production of covalently closed circular DNA (cccDNA) from the HBV genome through the repair of virion relaxed circular DNA (rcDNA) in the virion. As cccDNA is the transcrip...

    Authors: Rodolphe Suspène, Valérie Thiers, Jean-Pierre Vartanian and Simon Wain-Hobson

    Citation: Retrovirology 2016 13:84

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  19. Content type: Research

    Monocytes, the primary myeloid cell-type in peripheral blood, are resistant to HIV-1 infection as a result of the lentiviral restriction factor SAMHD1. Toll-like receptors recognize microbial pathogen componen...

    Authors: Henning Hofmann, Bénédicte Vanwalscappel, Nicolin Bloch and Nathaniel R. Landau

    Citation: Retrovirology 2016 13:83

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  20. Content type: Research

    Vaccination with inactivated (killed) whole-virus particles has been used to prevent a wide range of viral diseases. However, for an HIV vaccine this approach has been largely negated due to inherent safety c...

    Authors: Eunsil Choi, Chad J. Michalski, Seung Ho Choo, Gyoung Nyoun Kim, Elizabeth Banasikowska, Sangkyun Lee, Kunyu Wu, Hwa-Yong An, Anthony Mills, Stefan Schneider, U. Fritz Bredeek, Daniel R. Coulston, Shilei Ding, Andrés Finzi, Meijuan Tian, Katja Klein…

    Citation: Retrovirology 2016 13:82

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  21. Content type: Research

    Antigenicity of HIV-1 envelope proteins (Envs) of both lab-adapted and primary isolates expressed on the cell surface rarely match with in vitro neutralization of viruses, pseudo-typed with corresponding Envs....

    Authors: Supratik Das, Saikat Boliar, Nivedita Mitra, Sweety Samal, Manish Bansal, Wayne C. Koff and Bimal K. Chakrabarti

    Citation: Retrovirology 2016 13:81

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  22. Content type: Research

    The dimer initiation site/dimer linkage sequence (DIS/DLS) region of HIV is located on the 5′ end of the viral genome and suggested to form complex secondary/tertiary structures. Within this structure, stem-lo...

    Authors: Sayuri Sakuragi, Masaru Yokoyama, Tatsuo Shioda, Hironori Sato and Jun-ichi Sakuragi

    Citation: Retrovirology 2016 13:79

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  23. Content type: Review

    Natural killer (NK) cells belong to the innate immune system and protect against cancers and a variety of viruses including retroviruses by killing transformed or infected cells. They express activating and in...

    Authors: Elisabeth Littwitz-Salomon, Ulf Dittmer and Kathrin Sutter

    Citation: Retrovirology 2016 13:77

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  24. Content type: Research

    Antibody-dependent cellular cytotoxicity (ADCC), which mainly mediated by natural killer (NK) cells, may play a critical role in slowing human immunodeficiency virus type-1 (HIV-1) disease progression and prot...

    Authors: Xueying Fan, Liyan Zhu, Hua Liang, Zhe Xie, Xiangbo Huang, Shuo Wang and Tao Shen

    Citation: Retrovirology 2016 13:76

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  25. Content type: Research

    Entry of human immunodeficiency virus type 1 (HIV-1) into cells involves the interaction of the viral gp120 envelope glycoproteins (Env) with cellular CD4 and a secondary coreceptor, which is typically one of ...

    Authors: Katharina Borm, Martin R. Jakobsen, Kieran Cashin, Jacqueline K. Flynn, Paula Ellenberg, Lars Ostergaard, Benhur Lee, Melissa J. Churchill, Michael Roche and Paul R. Gorry

    Citation: Retrovirology 2016 13:74

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  26. Content type: Research

    Several members of the TRIM family have been implicated in antiviral defense. Our previous report showed that human TRIM11 potently inhibited HIV-1 transduction by reducing the viral reverse transcripts. These...

    Authors: Ting Yuan, Weitong Yao, Kenzo Tokunaga, Rongge Yang and Binlian Sun

    Citation: Retrovirology 2016 13:72

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  27. Content type: Research

    HIV-1 integrase is the target for three FDA-approved drugs, raltegravir, elvitegravir, and dolutegravir. All three drugs bind at the active site of integrase and block the strand transfer step of integration....

    Authors: Janani Varadarajan, Mary Jane McWilliams, Bryan T. Mott, Craig J. Thomas, Steven J. Smith and Stephen H. Hughes

    Citation: Retrovirology 2016 13:71

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  28. Content type: Research

    HIV-1 typically develops resistance to any single antiretroviral agent. Combined anti-retroviral therapy to reduce drug-resistance development is necessary to control HIV-1 infection. Here, to assess the utili...

    Authors: Muntasir Alam, Takeo Kuwata, Kazuya Shimura, Masaru Yokoyama, Kristel Paola Ramirez Valdez, Kazuki Tanaka, Yasuhiro Maruta, Shinya Oishi, Nobutaka Fujii, Hironori Sato, Masao Matsuoka and Shuzo Matsushita

    Citation: Retrovirology 2016 13:70

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  29. Content type: Meeting abstracts

    Oral presentations

    Authors: Irena Zurnic, Sylvia Hütter, Ute Lehmann, Nicole Stanke, Juliane Reh, Tobias Kern, Fabian Lindel, Gesche Gerresheim, Martin Hamann, Erik Müllers, Paul Lesbats, Peter Cherepanov, Erik Serrao, Alan Engelman, Dirk Lindemann, Claire Da Silva Santos…

    Citation: Retrovirology 2016 13(Suppl 1):68

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    This article is part of a Supplement: Volume 13 Supplement 1

  30. Content type: Research

    Human endogenous retroviruses (HERVs) are ancient sequences integrated in the germ line cells and vertically transmitted through the offspring constituting about 8 % of our genome. In time, HERVs accumulated m...

    Authors: Nicole Grandi, Marta Cadeddu, Jonas Blomberg and Enzo Tramontano

    Citation: Retrovirology 2016 13:67

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  31. Content type: Short report

    The latent HIV-1 reservoir represents the primary barrier to the eradication of HIV-1 infection. The design of novel reservoir-clearance strategies, however, is impeded in part by the inability to distinguish...

    Authors: Nischal Ranganath, Teslin S. Sandstrom, Saleh Fadel, Sandra C. Côté and Jonathan B. Angel

    Citation: Retrovirology 2016 13:66

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  32. Content type: Research

    In contrast to adult HIV infection, where slow disease progression is strongly linked to immune control of HIV mediated by protective HLA class I molecules such as HLA-B*81:01, the mechanisms by which a minori...

    Authors: M.-H. Tsai, M. Muenchhoff, E. Adland, A. Carlqvist, J. Roider, D. K. Cole, A. K. Sewell, J. Carlson, T. Ndung’u and P. J. R. Goulder

    Citation: Retrovirology 2016 13:65

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  33. Content type: Research

    The p6 region of the HIV-1 structural precursor polyprotein, Gag, contains two motifs, P7TAP11 and L35YPLXSL41, designated as late (L) domain-1 and -2, respectively. These motifs bind the ESCRT-I factor Tsg101 an...

    Authors: Susan M. Watanabe, Viviana Simon, Natasha D. Durham, Brittney R. Kemp, Satoshi Machihara, Kimdar Sherefa Kemal, Binshan Shi, Brian Foley, Hongru Li, Benjamin K. Chen, Barbara Weiser, Harold Burger, Kathryn Anastos, Chaoping Chen and Carol A. Carter

    Citation: Retrovirology 2016 13:64

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  34. Content type: Research

    Patients of African ancestry with untreated HIV-1 infection and carrying the G1 or G2 kidney disease risk variants (Vs) at the APOL1 gene have a tenfold higher risk of developing HIV-associated nephropathy (HIVA...

    Authors: Joanna Mikulak, Ferdinando Oriolo, Federica Portale, Paolo Tentorio, Xiqian Lan, Moin A. Saleem, Karl Skorecki, Pravin C. Singhal and Domenico Mavilio

    Citation: Retrovirology 2016 13:63

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  35. Content type: Research

    Mucosal HIV-1 transmission predominantly results in a single transmitted/founder (T/F) virus establishing infection in the new host despite the generally high genetic diversity of the transmitter virus populat...

    Authors: Corinna S. Oberle, Beda Joos, Peter Rusert, Nottania K. Campbell, David Beauparlant, Herbert Kuster, Jacqueline Weber, Corinne D. Schenkel, Alexandra U. Scherrer, Carsten Magnus, Roger Kouyos, Philip Rieder, Barbara Niederöst, Dominique L. Braun, Jovan Pavlovic, Jürg Böni…

    Citation: Retrovirology 2016 13:62

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  36. Content type: Research

    Follicular dendritic cells (FDCs) are important components in the organization of germinal centers in lymphoid tissue where, following antigen presentation, B cells differentiate into memory B cells. The possi...

    Authors: Farideh Sabri, Alejandro Prados, Raquel Muñoz-Fernández, Rebecka Lantto, Pablo Fernandez-Rubio, Aikaterini Nasi, Sylvie Amu, Jan Albert, Enrique Garcia Olivares and Francesca Chiodi

    Citation: Retrovirology 2016 13:61

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  37. Content type: Short report

    The glycan supersite centered on N332 in the V3 base of the HIV-1 envelope (Env) is a target for broadly neutralizing antibodies (bnAbs) such as PGT121 and PGT128. In this study, we examined the basis of resis...

    Authors: Suprit Deshpande, Shilpa Patil, Rajesh Kumar, Tandile Hermanus, Kailapuri G. Murugavel, Aylur K. Srikrishnan, Suniti Solomon, Lynn Morris and Jayanta Bhattacharya

    Citation: Retrovirology 2016 13:60

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  38. Content type: Research

    Th17 cells are permissive to HIV-1 infection and their depletion from the gut of infected individuals leads to microbial translocation, a major cause for non-AIDS co-morbidities. Most recent evidence supports ...

    Authors: Vanessa Sue Wacleche, Jean-Philippe Goulet, Annie Gosselin, Patricia Monteiro, Hugo Soudeyns, Rémi Fromentin, Mohammad-Ali Jenabian, Shant Vartanian, Steven G. Deeks, Nicolas Chomont, Jean-Pierre Routy and Petronela Ancuta

    Citation: Retrovirology 2016 13:59

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  39. Content type: Research

    Foamy viruses (FVs) of the Spumaretrovirinae subfamily are distinct retroviruses, with many features of their molecular biology and replication strategy clearly different from those of the Orthoretroviruses, such...

    Authors: Yang Liu, Matthew J. Betts, Janet Lei, Guochao Wei, Qiuying Bao, Timo Kehl, Robert B. Russell and Martin Löchelt

    Citation: Retrovirology 2016 13:57

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  40. Content type: Research

    Virus transmission from various wild and domestic animals contributes to an increased risk of emerging infectious diseases in human populations. HTLV-1 is a human retrovirus associated with acute T-cell leukem...

    Authors: Yoshimi Enose-Akahata, Breanna Caruso, Benjamin Haner, Emily Charlip, Govind Nair, Raya Massoud, Bridgette J. Billioux, Joan Ohayon, William M. Switzer and Steven Jacobson

    Citation: Retrovirology 2016 13:56

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  41. Content type: Correspondence

    8E5/LAV cells harbor a single HIV provirus, and are used frequently to generate standards for HIV genome quantification. Using flow cytometry-based in situ mRNA hybridization validated by qPCR, we find that di...

    Authors: Kaley M. Wilburn, Henry C. Mwandumba, Kondwani C. Jambo, Saikat Boliar, Sabrina Solouki, David G. Russell and David W. Gludish

    Citation: Retrovirology 2016 13:55

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  42. Content type: Research

    In HIV-1 infected cells, the integrated viral DNA is transcribed by the host cell machinery to generate the full length HIV-1 RNA (FL RNA) that serves as mRNA encoding for the Gag and GagPol precursors. Virion...

    Authors: Hala El Mekdad, Emmanuel Boutant, Hassan Karnib, Marina E. Biedma, Kamal Kant Sharma, Iuliia Malytska, Géraldine Laumond, Marion Roy, Eléonore Réal, Jean-Christophe Paillart, Christiane Moog, Jean Luc Darlix, Yves Mély and Hugues de Rocquigny

    Citation: Retrovirology 2016 13:54

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