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Fig. 2 | Retrovirology

Fig. 2

From: Whole genome sequencing of 51 breast cancers reveals that tumors are devoid of bovine leukemia virus DNA

Fig. 2

Analysis of sequence variation and proviral load in sequence alignments. a Neighbour-joining phylogenetic tree of BLV and HTLV-1 genomes. b Using the ART simulation tool (NIH), Illumina-like 100 bp paired-reads were generated in silico from the mutants. 880 simulated reads were probed for alignment on BLV AF033818 using Bowtie2 and visualized using IGV. c Correlation between proviral loads and predicted number of reads

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