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Table 1 Primers used for cloning the XtERV-S provirus and for expression studies

From: A novel class III endogenous retrovirus with a class I envelope gene in African frogs with an intact genome and developmentally regulated transcripts in Xenopus tropicalis

Primer

Sequence (5′–3′)

Cloning XtERV-S

 

 XP1 F

CTC GAG GAT TCC CCA AGT CAC ATG AGA TG

 XP1 R

GCG GCC GCG ACT TAC TGC TGG CCG AAA TAC TC

 XP2 F

CTC GAG CTG TCA ATC TCA AGC AGT ATC GCA TAC

 XP2 R

GCG GCC GCC CAC TCA GGG TCG GTT CTG TTT ATC CAA CTC

 XP3 F

CTC GAG TAA TGT AAC AAA CTG TTG GAT ATG TG

 XP3 R

GCG GCC GCT GTA ATA AAG GGG TTA ACC TTT ATC

LTR cloning into pGL3 basic

 

 XtERV-S LTR FW

GGT ACC TGA TTT GTA TGA TTT ACA ATT TAT ACA TG

 XtERV-S LTR RE

GGA TCC GTA ATA AAG GGG TTA ACC TTT ATC

 MoMLV LTR FW

GGA TCC TGA AAG ACC CCA CCT GTA GGT TTG GCA

 MoMLV LTR RE

AAG CTT TGA AAG ACC CCC GCT GAC GGG TAG TC

Gag cloning into eGFPC1

 

 Gag FW

GGA TCC TTA TGT TCT GCT GGT TAA AAA ACA AGG TTA G

 Gag Rev

CTC GAG ATC TAT AGG ACT GGG CAC CTC

  1. Underlined regions of the sequence indicate the restriction sites used for cloning