Skip to main content

Table 2 Long conserved MEME motifs found in BLV gp51 env sequences

From: Computational analysis of envelope glycoproteins from diverse geographical isolates of bovine leukemia virus identifies highly conserved peptide motifs

Block

MEME Motif

MEME E-value

Amino acid conservation (%)

Genetic distance (%)

Nucleotide conservation

p value

1.

I

6.7e−2042

98.0

1.2

0.813

0.007

2.

II

8.4e−2032

99.5

2.3

0.800

0.063

3.

III

9.7e−2032

99.1

3

0.800

0.056

4.

IV

1.8e−2099

99.6

1.3

0.807

0.037

5.

V

5.4e−2042

97.3

2.5

0.818

0.029

6.

VI

7.5e−1028

94.4

4.6

b/t

n/a

  1. b/t, value is below threshold of 80% conservation or 0.80
  2. n/a, not applicable
  3. %, resulting values of mean genetic distances were multiplied by 100
Back to article page

Retrovirology

ISSN: 1742-4690

Contact us