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Table 2 Resistance profiles of the 10 samples presenting a dual infection HIV-1/M+O and/or a HIV-1/MO recombinant form

From: Multiple HIV-1/M + HIV-1/O dual infections and new HIV-1/MO inter-group recombinant forms detected in Cameroon

Samples

Profile

Protease

RT

Resistance associated mutations and resistance interpretationa

HIV-1/M species

HIV-1/O species

Protease

RT

Resistance profileb

Protease

RT

Resistance profile

YBF221

Dual

M + O

M + O

K20I M36I L63P/L L89M

V90I

 

L10V L33I M36I M46L/M I62V A71V K20C L63T L89T

T69S M184V A98G V179E Y181C L210Y

ATV, IDV, 3TC/ FTC, NNRTI LPV, SQV, ABC

YBF280

Dual

M + O

M + O

K20I M36I V77I L89M

None

 

L10V V11I I15V M36I I62V A71V K20C D60N/S L63I L89I

A98G K103R V179E L210Y

SQV ATV

YBF301

Dual

M + O

M + O

L10V K20I L24L/I M36I L89M

None

SQV

L10V I15V M36I I62V A71V K20C L63T/A L89M

M184V A98G K103R V179E Y181C L210Y

SQV, 3TC/FTC, NNRTI ATV, ABC

YBF320

Dual

M + O

M + O

K20I M36I L89M

K101Q

 

L10I/V I15V M36I I62V A71V K20C L63T L89I

A98G V179E Y181C L210Y

SQV, NNRTI ATV

YBF211

Dual + recombinant

M + O

M + O

I15L K20I M36I L63P L89M

None

 

L10V I15V M36I I62V A71V K20C L63T L89I

A98G V179E Y181C L210Y

SQV, NNRTI ATV

YBF212

Dual + recombinant

M + O

M + O

K20I M36I L89M

E138A V179I K101Q

RPV ETR

L10I I15V L33V M36I I62V A71V/I K20C F53Y/C D60S L63A L89I

A98G V179E Y181C L210Y

ATV, SQV, NNRTI

YBF205

Dual + recombinant

M + O

O

K20I L24L/I M36I L89M

 

SQV

L10I I15V M36I I62V A71V K20C D60N/S L63T L89I

A98G K103R V179E L210Y

SQV ATV

YBF274

Single + Recombinant

O

O

 

L10V/I I15V M36I D60E I62V A71V K20C L63T L89I

A98G V179E Y181C L210Y

ATV, SQV, NNRTI

YBF298

Single + recombinant

M

M

K20I D30N M36I D60N G73S L89M

None

NFV SQV

YBF282

Recombinant alone

M

M

G16E K20I M36I L63P/L L89M

None

 

-

-

 
  1. aAccording to the ANRS resistance interpretation’s algorithm v25
  2. bIn underline = resistance; italic = possible resistance