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Fig. 3 | Retrovirology

Fig. 3

From: Multiple HIV-1/M + HIV-1/O dual infections and new HIV-1/MO inter-group recombinant forms detected in Cameroon

Fig. 3

Similarity plots for vpr sequences of the 5 recombinant forms. Plots were generated by SimPlot software with 200 nucleotide (nt) windows, 20 nt increments, and the Kimura 2-parameter method with a transition-transversion (Ts/Tv) ratio of 2.0. Each of the 5 samples (YBF211 (a), YBF212 (b), YBF205 (c), YBF298 (d), and YBF274 (e)) was queried against an HIV-1/M subtype CRF02-AG (02_AG.IBNG.L39106) or subtype D (D.UG.92.92UG001.AJ320484) in red, and an HIV-1/O (O.BE.87.ANT70.L20587) in blue. YBF298 (d) was also queried against the recombinant form 97CA.MP645 (grey line) previously described by Peeters et al. [10]

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Retrovirology

ISSN: 1742-4690

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