Retrovirology

Table 2 Nucleotide and amino acid substitution rate for 25 novel BLV complete provirus and eight known BLV whole genome

From: A new genotype of bovine leukemia virus in South America identified by NGS-based whole genome sequencing and molecular evolutionary genetic analysis

	LTR	p15	p24	p12	pro	pol	gp51	gp30	tax	rex	R3	G4	All
Nucleotide^a	0.013	0.023	0.030	0.022	0.025	0.023	0.023	0.027	0.023	0.016	0.027	0.013	0.023
Amino-acid^b	–	0.020	0.006	0.012	0.021	0.014	0.018	0.018	0.053	0.030	0.057	0.028	–

^aAverage nucleotide substitution per site calculated using the Jukes-Canter model
^bAverage amino acid substitution per site calculated using the p-distance model

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ISSN: 1742-4690

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