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Table 1 Sequence comparison of A3H with other deaminase-active A3 proteins and theoretical isoelectric points (pI)

From: Sequence and structural determinants of human APOBEC3H deaminase and anti-HIV-1 activities

 

Zinc-binding domain (Z) type

% Sequence identity to A3H a

Theoretical pI b

A3A (1–199)

Z1

36

6.3

A3C (1–190)

Z2

38

7.5

A3F-CD2 (185–373)

Z2

36

5.0

A3G-CD2 (191–384)

Z1

35

6.2

A3H HapII (1–183)

Z3

100

8.9

  1. aSequence identity analysis was performed using Lasergene software (DNASTAR, Inc.).
  2. bThe theoretical pI values were calculated using the Protparam online web-based program (http://web.expasy.org/compute_pi/).