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Table 1 Nucleoside RT inhibitor-related mutation frequencies in treatment-experienced and naïve patients

From: Clinical, virological and biochemical evidence supporting the association of HIV-1 reverse transcriptase polymorphism R284K and thymidine analogue resistance mutations M41L, L210W and T215Y in patients failing tenofovir/emtricitabine therapy

 

Naïve

Tenofovir/Emtricitabine therapy failure

Mutation

Mutation frequency(%)

Mutation frequency(%)

P

V35I

11.0

23.1

1.82 x 10 -2

T39A

5.1

17.3

3.75 x 10 -3

M41L

2.5

23.1

3.07 x 10 -6

A62V

6.7

4.87 x 10 -3

K65R

3.8

ns

D67N

21.2

1.42 x 10 -7

T69N

7.7

2.13 x 10 -3

K70R

14.4

2.02 x 10 -5

L74I

5.8

1.08 x 10 -2

A98G

1.7

7.7

3.65 x 10 -2

K103N

4.2

21.2

1.25 x 10 -4

V108I

13.5

3.99 x 10 -5

V118I

2.5

13.5

2.46 x 10 -3

S162A

8.5

1.9

3.59 x 10 -2

Q174R

5.8

1.09 x 10 -2

V179I

2.5

10.6

1.57 x 10 -2

Y181C

17.3

2.47 x 10 -6

M184V

0.8

42.3

1.76 x 10 -14

G190A

15.4

1.00 x 10 -5

H208Y

9.6

5.99 x 10 -4

L210W

0.8

18.3

6.23 x 10 -6

L214F

79.7

91.3

1.65 x 10 -2

T215F

10.6

3.05 x 10 -4

T215Y

19.2

6.00 x 10 -7

K219E

7.7

2.14 x 10 -3

K219Q

0.8

9.6

2.89 x 10 -3

K223E

4.8

2.44 x 10 -2

L228H

9.6

6.02 x 10 -4

L228R

7.7

2.16 x 10 -3

R284K

2.5

9.6

2.87 x 10 -2

V292I

11.0

21.2

4.49 x 10 -2

E297K

19.5

35.6

7.82 x 10 -3

G333E

6.8

15.4

4.60 x 10 -2

  1. Reported P-values indicate statistically significant differences, corrected for the multiple-hypothesis testing by the Benjamini-Hochberg method, with a false discovery rate of 0.05 with respect to the results from isolates from drug-naïve patients (N = 118). For the chi-square contingency tests, the therapy failure group (N = 104) included samples from patients who were receiving the inhibitor at the time of genotypic testing and showed a viral load above 1000 RNA copies per ml. ns, not significant.