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Figure 4 | Retrovirology

Figure 4

From: Genotyping of TRIM5 locus in northern pig-tailed macaques (Macaca leonina), a primate species susceptible to Human Immunodeficiency Virus type 1 infection

Figure 4

Phylogenetic analysis of primate TRIMCyp recognition domain. (A) Neighbor-joining nucleotide tree of the 11 Northern pig-tailed macaques based on TRIMCyp. Bootstrap values are based on 1,000 replicates. (B) Alignment of putative CypA amino acid sequences of primate TRIMCyp. The gray bar indicates mutation sites in Old World primates, and the bold bar indicates deletion mutations, as compared to A. trivirgatus. (C) Phylogenetic analysis of the primate TRIMCyp recognition domain (based on CypA amino acid sequence) with the A. trivirgatus as outgroup. Bootstrap values are based on 1,000 replicates.

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