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Table 3 Estimates of genetic diversity of envelope gp41 sequences within mother sets and within infant sets

From: Characterization of HIV-1 envelope gp41 genetic diversity and functional domains following perinatal transmission

Patient

Mother sets

Infant sets

 

N

θw

θc

N

θw

θc

B

14

0.02

0.03

14

0.01

0.01

D

14

0.02

0.03

20

0.03

0.03

E

13

0.02

0.03

13

0.01

0.01

F

17

0.01

0.01

8

0.01

0.01

G

20

0.01

0.02

15

0.01

0.02

Total

78

0.02

0.02

70

0.01

0.02

  1. N = Number of gp41 clones sequenced
  2. θw = genetic diversity estimated by the method of Watterson
  3. θc = genetic diversity estimated by Coalesce
  4. Totals were calculated as averages of all values