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  • Open Access

The origin of HTLV-1 in the South Bahia by phylogenetic, mitochondrial DNA and β-globin analysis

  • 1Email author,
  • 1,
  • 2,
  • 3,
  • 1,
  • 3,
  • 2,
  • 4 and
  • 2
Retrovirology201411 (Suppl 1) :P49

https://doi.org/10.1186/1742-4690-11-S1-P49

  • Published:

Keywords

  • Posterior Probability
  • Gamma Distribution
  • Southern Region
  • Blood Collection
  • Bootstrap Support

In order to clarify the HTLV introduction and dispersion in the south of Bahia, we analyzed 29 samples from HTLV-1 seropositive women. Before the blood collection, all of them answered a standardized questionnaire. The DNA was extracted by QIAgen Kit. It was performed a nested-PCR to the LTR region of the HTLV. The sequences were submitted to the LASP HTLV-1 Automated Subtyping Tool. The phylogenetic analyses were generated using the neighbor-joining e máxima-verossimilhança methods. The evolutionary model of Tamura-Nei with gamma distribution was selected as the best adaptive model by software Modeltest 3.7. The likelihood ratio was used to calculate the statistical support for the branches in trees. Bayesian tree were constructed to verify the posterior probability statistical parameter. To evaluate genetic ancestry of the population, it was analyzed mtDNA ancestry markers and β-globina haplotypes. From the total, 21 samples were successfully amplified and sequenced and they were classified as HTLV-1 aA (bootstrap support of 100%). The phylogeny analysis showed multiple introductions of the virus in Brazil. In addition, for the first time, Mozambique sequences were grouped with Brazilian and South Africa sequences, supporting the hypothesis that Africans infected with the virus have been brought from the southern regions of Africa. In relation to the genetic ancestry, the African ethnicity was predominantly found by mtDNA markers. In addition, the type benin was detected by β-globin analyses. These data corroborate to clarify the introduction and dispersion of this virus in Brazil, especially in the Bahia.

Authors’ Affiliations

(1)
Universidade Estadual de Santa Cruz, Ilhéus, Bahia, Brazil
(2)
Fundação Osvaldo Cruz, Salvador, Bahia, Brazil
(3)
Escola Bahia de Medicina e Saúde Pública/Fundação Bahiana para Desenvolvimento das Ciências, Salvador, Bahia, Brazil
(4)
Universidade do Sudoeste da Bahia, Vitória da Conquista, Bahia, Brazil

Copyright

© Gadelha et al; licensee BioMed Central Ltd. 2014

This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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