Table 1 Online resources on host genes in HIV biology and disease
From: GuavaH: a compendium of host genomic data in HIV biology and disease
| Web site | URL | Content |
|---|---|---|
| Associated sites to GuavaH | ||
| PEACHi | http://peachi.labtelenti.org | Querying of cellular responses to HIV in vitro (SupT1 cells) |
| LITCHi | http://litchi.labtelenti.org | Querying of expression data during HIV latency and upon reactivation in a primary CD4+ T cell model |
| G2G | http://g2g.labtelenti.org | Interactive HIV-host genome-to-genome map of the HLA class I locus and viral genome variation |
| External sites | ||
| Gene overlapper | http://hivsystemsbiology.org/GeneListOverlapper/ | Interactive overlapping of output from genome-wide surveys of host cell genes linked to HIV infection |
| NCBI HIV-1 Human protein interaction database | http://www.ncbi.nlm.nih.gov/projects/RefSeq/HIVInteractions/ | The HIV-1, human protein interaction data are based on literature reports. |
| Reactome HIV | http://reactome.org | Visualization, interpretation and analysis of pathway knowledge |
| VirusMINT – Virus molecular interaction database | http://mint.bio.uniroma2.it/virusmint/Welcome.do | Interactions between human and HIV proteins are integrated in the human protein interaction network |
