Skip to main content

Advertisement

Table 1 Online resources on host genes in HIV biology and disease

From: GuavaH: a compendium of host genomic data in HIV biology and disease

Web site URL Content
Associated sites to GuavaH   
PEACHi http://peachi.labtelenti.org Querying of cellular responses to HIV in vitro (SupT1 cells)
LITCHi http://litchi.labtelenti.org Querying of expression data during HIV latency and upon reactivation in a primary CD4+ T cell model
G2G http://g2g.labtelenti.org Interactive HIV-host genome-to-genome map of the HLA class I locus and viral genome variation
External sites   
Gene overlapper http://hivsystemsbiology.org/GeneListOverlapper/ Interactive overlapping of output from genome-wide surveys of host cell genes linked to HIV infection
NCBI HIV-1 Human protein interaction database http://www.ncbi.nlm.nih.gov/projects/RefSeq/HIVInteractions/ The HIV-1, human protein interaction data are based on literature reports.
Reactome HIV http://reactome.org Visualization, interpretation and analysis of pathway knowledge
VirusMINT – Virus molecular interaction database http://mint.bio.uniroma2.it/virusmint/Welcome.do Interactions between human and HIV proteins are integrated in the human protein interaction network