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Table 2 Proportion of new diagnoses with the 1 st , 2 nd and 3 rd most observed subtypes in each country of sampling compared to 1 st , 2 nd and 3 rd most observed subtypes among natives (unadjusted values only)

From: HIV-1 subtype distribution and its demographic determinants in newly diagnosed patients in Europe suggest highly compartmentalized epidemics

 

1st

%*

2nd

%

3rd

%

AT samp

B

50.50

CRF01_AE

13.13

AG

12.12

AT origin

B

61.76

CRF01_AE

16.18

A1

11.76

BE samp

B

53.18

CRF02_AG

10.45

C

8.18

BE origin

B

81.36*

C

5.93

CRF02_AG

2.54

CY samp

B

45.83

A1

37.50

C

8.33

CY origin

B

73.68

A1

21.05

C

5.26

CZ samp

B

76.92

A1

9.09

CRF01_AE

6.99

CZ origin

B

90.18*

A1

3.57

C

2.68

DE samp

B

89.84

CRF02_AG

3.30

CRF01_AE

2.20

DE origin

B

95.86*

CRF01_AE

1.59

CRF02_AG

0.96

DK samp

B

60.14

C

10.81

CRF01_AE and A1

7.43

DK origin

B

79.17*

AE and G

5.21

C

4.17

ES samp

B

91.26

CRF02_AG

1.94

G

0.97

ES origin

B

94.23

A1, C, F, G, AE, AG

0.64

-

-

FI samp

B

56.90

CRF01_AE

18.97

C

10.34

FI origin

B

59.65

CRF01_AE

19.30

C

10.53

GR samp

B

47.81

A1

29.88

C

5.98

GR origin

B

51.67

A1

33.01

C

3.34

IE samp

B

63.16

C

21.05

CRF02_AG

7.89

IE origin

B

91.30*

C

8.70

-

-

IL samp

C

58.14

B

27.91

A1

11.63

IL origin

B

100.00

-

-

-

-

IT samp

B

75.88

F

8.54

CRF02_AG

6.03

IT origin

B

85.43*

F

9.93

AG and A1

1.32

LU samp

B

68.57

C

11.43

G and U/URFs

8.57

LU origin

B

90.00

-

-

-

-

NL samp

B

67.01

CRF02_AG and C

9.28

A1

7.22

NL origin

B

88.00*

C and AG

4.00

-

-

NO samp

B

52.13

C

19.15

CRF01_AE

6.38

NO origin

B

86.27*

C

7.84

CRF02_AG

1.96

PL samp

B

95.04

CRF01_AE and C and F

0.83

-

-

PL origin

B

93.80

CRF01_AE, A1, C and F

0.77

-

-

PT samp

B

39.17

G

30.00

C

6.25

PT origin

B

47.75

G

30.33

CRF02_AG

2.81

SE samp

B

47.62

CRF01_AE and C

14.28

CRF02_AG

8.10

SE origin

B

73.47*

CRF01_AE

12.24

CRF02_AG

5.10

SI samp

B

93.55

CRF01_AE and CRF02_AG and A1

1.61

-

-

SI origin

B

96.61

CRF02_AG

1.69

-

-

SK samp

B

81.82

C

9.09

-

-

SK origin

B

87.50

C

6.25

-

-

CS samp

B

88.06

G

5.97

CRF01_AE and C

2.99

CS origin

B

88.20

G

5.88

CRF01_AE

2.38

  1. * indicates that the difference between these two is significant. U/URFs were excluded from this table, since they represent a heterogeneous group of strains.