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Figure 1 | Retrovirology

Figure 1

From: HIV-1 envelope replication and α4β7 utilization among newly infected subjects and their corresponding heterosexual partners

Figure 1

Epidemiologically linked partner’s HIV-1 envelope sequences are phylogenetically linked. Full-length HIV-1 envelope transmitter (gray) and recipient (red) sequences were aligned with subtype reference sequences from the Los Alamos database using Clustal X. Paup was used to generate the maximum likelihood tree using parameters from FindModel best fit evolutionary model. Bootstrap values from 100 replicates were generated from a neighbor joining tree and are noted on each node of interest. Couple IDs and HXB2 reference outgroup node are noted.

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Retrovirology

ISSN: 1742-4690

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