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Fig. 2 | Retrovirology

Fig. 2

From: Increased HIV-1 pretreatment drug resistance with consistent clade homogeneity among ART-naive HIV-1 infected individuals in Ethiopia

Fig. 2

Neighbor-joining phylogenetic tree of the pol gene (PR and RT nucleotide sequences) of 51 samples along with reference sequences from the Los Alamos HIV database (http://hiv-web.lanl.gov). Those with GenBank accession number MT416661–MT416711 are sequences from this study and sequences with PDR mutations are highlighted with a blue node while one (Subtype A1) is highlighted with a red node. The rest are HIV-1 reference sequences retrieved from the Los Alamos HIV database. Reference sequences: U46016, AY242579–AY242597, KU319672–KU319798 (C-Ethiopia), AY772699 (C-S. Africa), AF067155 (C-India), U52953 (C-Brazil), AX149771 (BC-China), and the rest reference sequences are non-C. Only bootstrap values > 70% are indicated at each node

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