Fig. 7

Quantitative analysis of HERV-K 3q12.3 proviral transcripts from total and cytoplasmic RNAseq data. a Total and cytoplasmic DESeq2 normalized read counts for HERV-K 3q12.3 provirus, were visualized with IGV. They are shown below a diagram of the genome of the provirus showing the open reading frames and LTRs which contain the RcREs. b The number of normalized reads mapping uniquely to the HERV-K 3q12.3 locus for total and cytoplasmic RNA are plotted for each of the samples transduced with either empty vector (EV), Rev, Tat, both Tat and Rev or Rec. c Quantitation of the data in b showing the fold change in read count relative to the sample transduced with the empty vector (EV)