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Table 1 Amino acid substitutions that stabilize soluble native-like trimers

From: Stabilizing HIV-1 envelope glycoprotein trimers to induce neutralizing antibodies

 

Hydrophobic

Aromatic

Proline/glycine

Disulfide bonds

Charged

Other

C1

   

E49C-L555Ca

E47Db

E106Tb

    

H72C-H564Ca

K49Eb

 
    

A73C-A561Ca

E64Kc

 
     

V65Kb

 
     

H66Rc

 
     

T106Ed

 

V1

L154Me

Y177We

  

S164Eb

 

V2

I165Lb

   

Q171Kf

 
 

I172Vf

   

I192Rf

 

C2

A204Ig

I203Fh

 

I201C-A433Cm,n

  
 

M271Id

F223Wd

    
 

F288Ld

     
 

T290Ad

     

V3

N300Me

N302Y/Fj

  

H308Rb

 
 

N302Me

A316Wc

    
 

R304Vd

A319Yd

    
 

S306Li

     
 

R308Li

     
 

T320Le

     

C3

     

N363Qd

C4

Y420Me

  

I201C-A433Cm,n

E429Rb

R432Qb

C5

   

A501C-T605Ck

A500Rb

 

FPp

    

F519Rj

F516Sd

     

L520Rj

 

HR1q

D589Vg

T538Fh

L556Pg

E49C-L555Ca

L568Dd

I535N/Mc,g,o

  

I548Fh

I559G/Pl

H72C-H564Ca

K588Eg

L543Nb,c

  

I573Fg

A561Pd

A73C-A561Ca

G588Rb

N553Sb

   

L568Gj

  

V570Hd

   

T569G/Pj,l

  

R585Hd

      

K588Qg

DSLr

   

A501C-T605Ck

  
 

K655Ig

E647Fg

M629Ph

   

HR2s

K658Vg

N651Fg

S636Gj

   
 

E662Ab

     
  1. aTorrents de la Pena et al. Cell Rep. 2017
  2. bGuenaga et al. J Virol. 2015
  3. cde Taeye et al. Cell. 2015
  4. dSteichen et al., Immunity. 2016
  5. eChuang et al. J Virol. 2017
  6. fRinge et al. J Virol. 2017
  7. gRutten et al. Cell Rep. 2018
  8. hSullivan et al. J Virol. 2017
  9. ide Taeye et al. J Biol Chem. 2017
  10. jGuenaga et al. Immunity. 2017
  11. kBinley et al. J Virol. 2000
  12. lSanders et al. J Virol. 2002
  13. mGuenaga et al. Plos Path. 2015
  14. nDo Kwon et al., Nat. Struct. Mol. Biol. 2015
  15. oDey et al., Virol. 2007
  16. pFusion peptide
  17. qHeptad repeat 1
  18. rDisulfide loop
  19. sHeptad repeat 2