Isolate ID | GenBank accession number | Subtype | Natural polymorphisms in integrase |
---|---|---|---|
14514 | KT988124 | B | K7R, D10E, S17N, M50I, K111Q, T112V, G123S, T125V, R127K, I220L, Y227F, N232D, D256E |
10387 | KX7140173 | B | D10E, V31I, L45Q, K111E, I113V, G123S, A124T, T125A, R127K, M154I, V201I, D207N, N232D, L234I |
10249 | KX714014 | B | D10E, V31I, L45Q, L101I, K111E, I113V, G123S, A124T, R127K, D207N, N232D, L234I |
14624 | KX714018 | B | D10E, S17N, A23V, L28I, S39C, V72I, L101I, G123S, R127K, N232D |
14637 | KT988125 | B | D10E, E11D, R20K, V31I, S39N, M50I, V72I, S119T, G123S, A124N, R127K, G193E, V201I, D286N |
14947 | KT988126 | B | D10E, E11D, R20K, V31I, S39N, M50I, S119T, G123S, A124N, R127K, G193E, V201I, T218S, D286N |
5326 | KX714021 | B | K7R, D10E, E11D, K14R, V31I, V32I, M50L, V72I, L101I, G123S, A124N, R127K, S195T, I203M, I220L, Y227F, N232D |
4742 | MG805951 | C | D10E, V31I, S39C, V72I, I84M, Q95P, F100Y, L101I, T112V, G123S, A124N, T125A, R127K, D167E, V201I, I203M, K215N, T218L, N232D, L234I, D278A, S283G, R284G |
10947 | MG805955 | C | D6E, D25E, V31I, L45Q, M50I, V72I, P90S, T93S, F100Y, L101I, G106A, T112V, G123S, T125A, R127K, K136Q, V201I, T218I, N232D, L234I, R269K, D278A, S283G, D288N |
6343 | MG805950 | CRF01_AE | D10E, K14R, A21T, V31I, S39N, T112V, G123S, T125A, R127K, G134N, I135V, K136R, D167E, V201I, N232D, L234I, S283G |
14515 | MG805952 | CRF02_AG | D10E, E11D, R20K, A21T, V31I, V72I, L101I, T112V, G123S, T125A, R127K, G134N, K136Q, D167E, V201I, N232D, L234I, V249I, S283G |
96USSN20 | MG805953 | AG | D10E, K14R, V31I, V72I, L101I, T112V, G123S, T125A, R127K, G134N, I135V, K136T, V201I, T206S, N232D, L234I, D256E, R269K, S283G |
pNL4.3 | Â | B | D10E, I113V, S119R, G123S, A124T, R127K, V151I, L234V |