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Fig. 4 | Retrovirology

Fig. 4

From: Multiple HIV-1/M + HIV-1/O dual infections and new HIV-1/MO inter-group recombinant forms detected in Cameroon

Fig. 4

a Recombination pattern of the full-length genome of YBF274. Analysis was performed using SimPlot software with 250 nucleotide (nt) windows, 20 nt increments, and the Kimura 2-parameter method with a transition-transversion (Ts/Tv) ratio of 2.0. Sequences representative of a strain of HIV-1/M (D.CD.1983.ELI_patent.A07108 in red) and O (O.CM.98.98CMA104.AY169802 in blue) were used. The genome map was obtained using the Recombinant HIV Drawing Tool (http://www.hiv.lanl.gov/content/sequence/DRAW_CRF/recom_mapper.html). b Recombination pattern of the full-length genome of YBF282. Analysis was performed using SimPlot software with 350 nucleotide (nt) windows, 20 nt increments, and the Kimura 2-parameter method with a transition-transversion (Ts/Tv) ratio of 2.0. Sequences representative of a strain of HIV-1/M (02_AG.NG.IBNG-patent DD409979 in red) and O (O.CM.98.98CMA104.AY169802 in blue) were used. The genome map was obtained using the Recombinant HIV Drawing Tool (http://www.hiv.lanl.gov/content/sequence/DRAW_CRF/recom_mapper.html)

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Retrovirology

ISSN: 1742-4690

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