From: Ultrasensitive single-genome sequencing: accurate, targeted, next generation sequencing of HIV-1 RNA
Allele | Donor 1 Sample 1 % Frequency (1585 uSGS) | Donor 1 Sample 2 % Frequency (675 uSGS) | Donor 2 Sample 3 % Frequency 1227 (uSGS) |
---|---|---|---|
D67N | 100 | 99.85 | 99.92 |
T69A | <0.06 | 0.15 | 0.08 |
T69I | 0.06 | <0.15 | <0.08 |
K70N | <0.06 | <0.15 | 0.08 |
K70Q | <0.06 | <0.15 | 1.07 |
K70T | <0.06 | <0.15 | 1.23 |
L74I | <0.06 | <0.15 | 0.08 |
K101E | 95.56 | 95.72 | <0.08 |
K101Q | 4.12 | 3.99 | 0.08 |
K101R | <0.06 | <0.15 | 0.49 |
V106I | 91.12 | 91.58 | 0.33 |
V108A | <0.06 | <0.15 | 0.08 |
V108I | 0.51 | <0.15 | 0.41 |
M184I | <0.06 | <0.15 | 0.16 |
M184V | <0.06 | <0.15 | 99.84 |
Y188C | 0.06 | <0.15 | <0.08 |
G190A | 99.81 | 100 | <0.08 |
G190E | <0.06 | <0.15 | 0.08 |
G190R | <0.06 | <0.15 | 0.08 |
G190T | 0.13 | <0.15 | <0.08 |
T215F | 0.06 | <0.15 | <0.08 |
T215R | <0.06 | <0.15 | <0.08 |
T215Y | 99.94 | 100 | 100 |
K219R | 99.94 | 99.85 | <0.08 |