From: Ultrasensitive single-genome sequencing: accurate, targeted, next generation sequencing of HIV-1 RNA
uSGS | LP-PCR-1 | |||
---|---|---|---|---|
AVG | STDV | AVG | STDV | |
A. | ||||
Copies of cDNA by qPCR | 134,193 | 45,940 | 134,193 | 45,940 |
Total # unique primer IDsa | 39,597 | 7491 | 17,614 | 6442 |
% cDNA amplified | 30% | 13% | 13% | 3.3% |
uSGS | LP-PCR-2 | LP-PCR-3 | ||||
---|---|---|---|---|---|---|
AVG | STDV | AVG | STDV | AVG | STDV | |
B. | ||||||
Copies of cDNA by qPCR | 81,040 | 21,192 | 81,040 | 21,192 | 81,040 | 21,192 |
Total # unique primer IDsa | 25,111 | 9046 | 15,794 | 1392 | 11,565 | 482 |
% cDNA amplified | 31% | 4.9% | 21% | 2.5% | 14% | 2.2% |