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Table 2 Mapping amino acid residues in the V3/C3 region associated with neutralization sensitivity

From: Association of mutations in V3/C3 domain with enhanced sensitivity of HIV-1 clade C primary envelopes to autologous broadly neutralizing plasma antibodies

Env-pseudotyped viruses (Env chimeras & point mutants)

Fold changes in ID50

Effect

HVTR-PG80v2.eJ7 wild type

–

–

HVTR-PG80v2.eJ38 wild type

–

–

HVTR-PG80v2.eJ38(v2.eJ7V3/C3)

>422

Increase

HVTR-PG80v2.eJ38(v2.eJ7V3-C4)

>138

Increase

HVTR-PG80v2.eJ38(v2.eJ7gp41)

0.8

No change

HVTR-PG80v2.eJ38(I307F)

1

No change

HVTR-PG80v2.eJ38(M316A)

1

No change

HVTR-PG80v2.eJ38(P326I)

>8

Increase

HVTR-PG80v2.eJ38(N362T)

1

No change

HVTR-PG80v2.eJ7(N332T)

1.2

No change

HVTR-PG80v2.eJ7(E328Q)

1.8

Decrease

HVTR-PG80v2.eJ7(T362N/A364S)*

1.0

No change

  1. * The T362N/A364S double mutations removed the N360 glycan and introduced N362 glycan in PG80v2.eJ7 Env
  2. Potential N-linked glycans are given in italic