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Table 3 Evolutionary rates across sampling times

From: Recombination elevates the effective evolutionary rate and facilitates the establishment of HIV-1 infection in infants after mother-to-child transmission

Patient

With recombinants

Inflection time (days)

Without recombinants

Rate 1

Rate 2

Rate 1

Rate 2

P1024

15.4

9.44

1163

4.38

1.88

P1031

3.95

1.84

1377

3.16

1.91

P1189

3.02

3.30

886

2.17

1.79

P1046

4.33

0.67

706

3.58

0.56

  1. Rate 1 rate before potential inflection point, Rate 2 rate after potential inflection point, Infection time time of potential change in rate. All rates are in units of 10−5 substitutions site−1 day−1 and were found at R2 > 0.90 and p < 0.001 by ordinary least squares regression, except Rate 2 of P1024 with recombinants at R2 = 0.82