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Table 1 DNA primers for plasmid constructions

From: Conserved determinants of lentiviral genome dimerization

Name

DNA sequence

HIV-1NL4-3

 5′-LΔAUG

5′-TGA CTA GCG GAG GCT AGT ACT AGA GAG ATG GGT GCG-3′

SIVcpzTAN1

 5′-LWT

5′-GAG AGC GTC AGT GTT GCA GGG GGA TCC TCT-3′

 5′-LΔAUG

5′-GTC TCT AGG TAA CAG CTG AAA TGG GTG CGA G-3′

 5′-LLR

5′-GGA AAT GGG TGC GAT ATC GTC AGT GTT-3′

 5′-LGC

5′-TCG GCT TGT GAC AGC GCG CAA TCA CAA GAG GCG A-3′

 5′-LHIV-1_loop

5′-GCA GGA CTC GGC TTG TGA AAG CGC GCA TCA CAA GAG GCG AGG CGG-3′

 NC

5′-CGG GCC ATA TGC TGC AGG GAG GAA AAA GA-3′

 NC

a5′-GCG GAG GAT CCT CAG TTG TTT CTG GTG GTG CAG TC-3′

SIVcpzUS

 5′-LWT

a5′-CCG TCG GAT CCG TTA ACT GAC GCT CTC GCA CCC AT-3′

 5′-LΔAUG

5′-GTC TCT AGG GGA AGG CCA TGG GTG CGA TAT C-3′

 5′-LLR

a5′-CCG TCG GAT CCG ATA TCG CAC CCA TCC TCT TCC CCT-3′

 NC

5′-CGG GCC ATA TGC TAC AGA AAG GAA ACG CT-3′

 NC

a5′-GCG GAG GAT CCT CAA TTA GCC TGT CTG TTT CC-3′

HIV-2ROD

 5′-LWT

5′-CGA GA AAC TCC GTC TTG CA CCG GGG GAT CC TCT AGA-3′

 5′-LΔAUG

5′-TTT AGA CAG GTA GAA GAT ATC GGG AGA TGG GCG CGA GAA-3′

 5′-LLR

5′-GGG AGA TGG GCG CGA TATC ACT CCG TCT TGA CCC-3′

 5′-LCCA

5′-AAA GGC GCG GGC CGA CCA ACC AAA GGC AGC GUG-3′

 5′-LHIV-1_loop

5′-AGA AAG GCG CGG GCC AAG CGC GCA GGC AGC GTG TGG AGC-3′

 5′-LGAGA

5′-AGA AAG GCG CGG GCC GAG AGG CAG CGT GTG GA-3′

  1. aReverse primers
  2. Recognition sites for restriction endonucleases are underlined. Introduced mutations are bolded