env | Clade | Full name | Origin | References |
---|---|---|---|---|
Transmitted/founder (T/F) | ||||
 3T | B | p1054.TC4.1499 | Plasma | [20] |
 6T | B | p63358.p3.4013 | Plasma | [20] |
 15T | B | p700010040.C9.4520 | Plasma | [20] |
 19T | B | pPRB958_06.TB1.4305 | Plasma | [20] |
 R463F | A1 | R463FPL16MAR07EnvE44 | Plasma | [49] |
 R880F | A1 | R880FPL12JAN07EnvA6 | Plasma | [49] |
 R66M | A/C | R66MPL7MAR06.3A9Env | Plasma | Unpublished |
 Z1792M | C | Z1792MPL18DEC07.3G7Env2 | Plasma | Unpublished |
Acute stage | ||||
 Z185F | C | Z185FPB24AUG02ENV3.1 | Blood | |
 Z205F | C | Z205FPB27MAR03ENV1.1 | Blood | |
 Z201M | C | Z201MPL7FEB03ENV2.1 | Plasma | [24] |
 Z221M | C | Z221MPL7MAR03ENV2.1 | Plasma | |
 Z153M | C | Z153MPL13MAR02ENV5.1 | Plasma | |
Macrophage tropic | ||||
 BaL | B | BaL.26 | Lung | [53] |
 JRFL | B |  | Brain | [6] |
 NA20 B59 | B |  | Brain | [5] |
 NA420 B33 | B |  | Brain | [5] |
 7766 FL2 | B | 7766 FL19-56-66 | Brain | [19] |
 10017 FL1 | B | 10017 FL9-1-2 | Brain | [19] |
 6568 FL1 | B | 6568 FL11-1-249 | Brain | [19] |
 CA110 OC1 | B | CA110 OC58-11-57 | Brain | [19] |
 CA110 SP1 | B | CA110 SP52-13-34 | Spleen | [19] |
 E21 B37-6 | B |  | Brain | [40] |
 E21 B100-1 | B |  | Brain | [40] |
Non-macrophage tropic | ||||
 JRCSF | B |  | CSF | [6] |
 NA20 LN8 | B |  | Lymph Node | [5] |
 NA420 LN40 | B | NA420 LN40/B33 | Lymph Node | [5] |
 7766 SP1 | B | 7766 SP13-33-41 | Spleen | [19] |
 10017 SP2 | B | 10017 SP10-9-65 | Spleen | [19] |
 6568 SP1 | B | 6568 SP6-11-9 | Spleen | [19] |
 CA110 SP2 | B | CA110 SP53-23-131 | Spleen | [19] |
 CA110 SP3 | B | CA110 SP53-6-122 | Spleen | [19] |
 E21 LN58-3 | B |  | Lymph Node | [40] |
 KM21 BL1-45 | G |  | Blood | [5] |
 KM21 S1-20 | G |  | Semen | [5] |