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Table 3 HLA-RM9 contact table

From: A molecular switch in immunodominant HIV-1-specific CD8 T-cell epitopes shapes differential HLA-restricted escape

  B0702 B8101 B4201 B4202
TL9 VdW HB/SB VdW HB/SB VdW HB/SB VdW HB/SB
Arg1 37 5 35 4 30 4 30 4
Pro2 23 0 22 0 26 0 21 1
Gln3 27 1 23 2 24 2 26 2
Val4 2 0 2 0 2 0 2 0
Pro5 12 0 10 1 8 0 9 0
Leu6 17 0 6 0 4 0 10 0
Arg7 17 4 4 0 11 0 11 0
Pro8 9 1 9 0 15 1 14 1
Leu9 31 5 30 5 56 10 30 4
Total 175 16 141 12 176 17 153 12
BSA (Å) 1813.8   1843.4   1720.2   1796  
SC (Å) 0.757   0.751   0.797   0.807  
  1. HB = hydrogen bond, SB = salt bridge, vdW = van der Waals interactions, BSA = buried surface area, SC = surface complementarity.
  2. *A 3.4 Å cut-off was used for HBs and SBs, and a 4 Å cut-off was used for vdW.