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Table 2 HLA-TL9 contact table

From: A molecular switch in immunodominant HIV-1-specific CD8 T-cell epitopes shapes differential HLA-restricted escape

  B0702 B8101 B4201
TL9 VdW HB/SB VdW HB/SB VdW HB/SB
Thr1 26 4 27 5 23 4
Pro2 24 0 22 0 21 0
Gln3 28 1 26 1 24 2
Asp4 4 1 6 2 5 1
Gln5 0 0 2 1 0 1
Asn6 15 1 6 0 4 1
Thr7 9 3 5 2 7 0
Met8 23 2 8 0 25 2
Leu9 23 4 15 3 24 4
Total 152 16 117 14 133 15
BSA (Å) 1651.8   1726.2   1654.2  
SC (Å) 0.741   0.741   0.714  
  1. HB = hydrogen bond, SB = salt bridge, vdW = van der Waals interactions, BSA = buried surface area, SC = surface complementarity.
  2. *A 3.4 Å cut-off was used for HBs and SBs, and a 4 Å cut-off was used for vdW.