Primer name | Primer sequence |
---|---|
X01f | 5′-CACACAGCTAGCATCATGGGACAGACCGTAACTACCCCTCTG-3′ |
X01r | 5′-GCGAAGGCATAGCGGCTATCAGTGT-3′ |
X02f | 5′-ATCCACTTCGAGGGATCAGGAGCTC-3′ |
X02r | 5′-GCGAAGGCATAGCGGCTATCAGTGT-3′ |
X03f | 5′-AACTGGGACCTTGGCGTCGGC-3′ |
X03r | 5′-GTGTGTGCGGCCGCTCAGGGGGCCCCACGGGT-3′ |
M01f | 5′-CACACAGCTAGCATGGGCCAGACTGTTACCACTCCC-3′ |
M01r | 5′-CTGGGCGCTCGAGGGGAAAAG-3′ |
M02f | 5′-CTTTTCCCCTCGAGCGCCCAG-3′ |
M02r | 5′-CTTCGGCCAGGATATCAAGGCAGTTG-3′ |
M03f | 5′-CAACTGCCTTGATATCCTGGCCGAAG-3′ |
M03r | 5′-GTGTGTGCGGCCGCTTAGGGGGCCCCACGGGTTAATC-3′ |
M04f | 5′-CACACAGCGGCCGCCTGCCAGTCCCCCTGG-3′ |
M04r | 5′-GTGTGTCTCGAGGATATCAAGGCAGTTGTGTTGCAGCC-3′ |
M05f | 5′-CACACACTCGAGCTGCCAGTCCCCCTGG-3′ |
M05r | 5′-GTGTGTTCTAGAGATATCAAGGCAGTTGTGTTGCAGCC-3′ |
X04f | 5′-CACACAGGTACCCTGCCAGTCCCCCTGG-3′ |
X04r | 5′-GTGTGTGAATTCGCAGTCATGGGGGGCTTCCTTTTC-3′ |
X05f | 5′-CACACAGCGGCCGCCTGCCAGTCCCCCTGG-3′ |
X05r | 5′-GTGTGTCTCGAGGCAGTCATGGGGGGCTTCCTTTTC-3′ |
X06f | 5′-CACACACTCGAGCTGCCAGTCCCCCTGG-3′ |
X06r | 5′-GTGTGTTCTAGAGCAGTCATGGGGGGCTTCCTTTTC-3′ |
X07f | 5′-CACACAGGTACCATCTTGGCTGAGACGCACGGAACC-3′ |
X07r | 5′-GTGTGTGAATTCTCAGGGGGCCCCACGGGTTA-3′ |
X08f | 5′-CACACAGGTACCCCACCCTGTTTGATGAGGCACTGC-3′ |
X09r | 5′-GTGTGTGAATTCGTTTGACCAGTGCTTCTACCGCATGG-3′ |
X10r | 5′-GTGTGTGAATTCAGGTAGGCCACAGGCCGACGC-3′ |
X11r | 5′-GTGTGTGAATTCCTTGATAGGCCTTTTGCTGGTCTGGG-3′ |
X12r | 5′-GTGTGTGAATTCGTCTTCGGAGTGGGCTGCCCC-3′ |
X13r | 5′-GTGTGTGAATTCGGTTTGTAATAGGGCCCGAGTACCTCG-3′ |
X14f | 5′-CACACAGCGGCCGCGGAGGTCAGGGTCAGGAGCCCC-3′ |
X14r | 5′-GTGTGTCTCGAGGAATTCGGTACCAGTATTCCCTGGTCCAACAGCC-3′ |
X15r | 5′-GTGTGTGCGGCCGCTCAGTCACCTAAGGTCAGGAGGGAGGTCTG-3′ |
T01f | 5′-CACACATCTAGAGCCACCATGGCGGACGAGGGGAAGTCG-3′ |
T01r | 5′-GTGTGTGCGGCCGCTCACTTCATGAATGCCACTTCTGGGATC-3′ |
T02f | 5′-CACACAGCTAGCGCCACCATGAGAAAATACAGAAGCCACTGGTCTCAG-3′ |
T02r | 5′-GTGTGTGCGGCCGCTTAACTACTAGACCAATCTTGAAAACGGAAGC-3′ |
T03f | 5′-CACACAGCTAGCGCCACCATGCATCGTGATTCCTGTCCATTGG-3′ |
T03r | 5′- GTGTGTGCGGCCGCCTATTTCCTTTCATTTGACCTAGATCGACTACG-3′ |
T04f | 5′- CACACAGCTAGCGAAAAAAGAAGTAGAAATCGTGGCCCAC-3′ |
T05f | 5′- GAACTGTCGAATGGTGAAAAAGAAAGTGAAAATGAAGGCCCACCTCCCT |
CTTGGGG-3′ | |
T05r | 5′- CCCCAAGAGGGAGGTGGGCCTTCATTTTCACTTTCTTTTTCACCATTCGA |
CAGTTC-3′ | |
T06f | 5′- CACACAGCTAGCGCCACCATGAGTGGCTGTCGGGTATTCATCG-3′ |
T06r | 5′- GTGTGTGCGGCCGCTTAATTGCCACTGTCAACTGATCTGGACC-3′ |
X18f | 5′-GTCAACAAGCGGGTGGATCGCGTCCACCCCACCGTGCC-3′ |
X18r | 5′-GGCACGGTGGGGTGGACGCGATCCACCCGCTTGTTGAC-3′ |
X19f | 5′-GTCACCTTCCTGGTAAACACTGGCGCCCAACACTCCGTG-3′ |
X19r | 5′-CACGGAGTGTTGGGCGCCAGTGTTTACCAGGAAGGTGAC-3′ |
X20f | 5′-CACACAGAATTCCCTGCCTTCGCCTCCCAGGTAAG-3′ |
X20r | 5′-GTGTGTCTCGAGGGGGCCCCACGGGTTAATCTTATC-3′ |
X21f | 5′-AGCTCACTTACACGCCCTCCAAGCAGT-3′ |
X21r | 5′-ACTGCTTGGAGGGCGTGTAAGTGAGCT-3′ |
X22f | 5′-CTTCGCCTCCCAGCTAAGTCAGTCAG-3′ |
X22r | 5′-CTGACTGACTTAGCTGGGAGGCGAAG-3′ |
X26f | 5′-CACACAGAATTCGGAAAGGACCCTACACCGTCCTGC-3′ |
X27f | 5′-CACACAGAATTCCCCTCCAAGCAGTACAACAAGAGGTCTG-3′ |
Mir30f | 5'-AAGGCTCGAGAAGGTATATTGCTGTTGACAGTGAG-3' |
Mir30r | 5'-AGCCCCTTGAATTCCGAGGCAGTAGGCA-3' |
NXF1 - + KD | 5'-TGCTGTTGACAGTGAGCGACGACGTGCTTTGCTGTATAAATAGTGAAGCCAC |
AGATGTATTTATACAGCAAAGCACGTCGCTGCCTACTGCCTCGGA-3′ | |
NXF1-2 KD | 5′- TGCTGTTGACAGTGAGCGCACCCTGAGGATCATTGAAGAGTAGTGAAGCCA |
CAGATGTACTCTTCAATGATCCTCAGGGTATGCCTACTGCCTCGGA-3'; | |
NXF1-3 | 5'-TGCTGTTGACAGTGAGCGATGCCAGGAAGCCAAAGCTTACTAGTGAAGCCA |
KD | CAGATGTAGTAAGCTTTGGCTTCCTGGCACTGCCTACTGCCTCGGA-3' |
Codon optimized XMRV gag | 5′-ATGGGCCAGACCGTGACCACCCCCCTGAGCCTGACCCTGCAGCATTGGGG |
CGACGTGCAGCGGATCGCCAGCAACCAGAGCGTGGACGTGAAAAAGCGGAGATGGGTCACCTTCTGCAGCGCCGAGTGGCCCACCTTCAACGTGGGCTGGCCCCAGGACGGCACCTTCAATCTGGGCGTGATCAGCCAGGTCAAAAGCCGGGTGTTCTGCCCTGGCCCCCACGGACACCCTGACCAGGTGCCCTACATCGTGACCTGGGAGGCCCTGGCCTACGACCCTCCACCCTGGGTCAAGCCCTTCGTGTCCCCTAAGCCCCCACCCCTGCCTACAGCTCCAGTGCTGCCTCCTGGCCCTAGCGCCCAGCCTCCTAGCAGAAGCGCCCTGTACCCCGCCCTGACCCCATCCATCAAGAGCAAGCCCCCCAAGCCTCAGGTGCTGCCCGATTCTGGCGGCCCTCTGATCGACCTGCTGACCGAGGACCCCCCTCCATATGGCGCCCAGCCAAGCAGCAGCGCCAGAGAGAACAACGAGGAAGAGGCCGCCACCACCAGCGAGGTGTCCCCACCTAGCCCTATGGTGTCCCGGCTGCGGGGAAGAAGAGATCCTCCTGCCGCCGACAGCACCACCAGCCAGGCCTTCCCACTGAGAATGGGCGGCGACGGCCAGCTGCAGTACTGGCCTTTCAGCAGCAGCGACCTGTACAACTGGAAGAACAACAACCCCAGCTTCAGCGAGGACCCTGGCAAGCTGACCGCCCTGATCGAGAGCGTGCTGATCACCCACCAGCCCACCTGGGACGACTGCCAGCAGCTCCTGGGCACCCTGCTGACAGGCGAAGAGAAGCAGCGGGTGCTGCTGGAAGCCAGAAAGGCCGTGCGGGGCAACGACGGCAGACCTACCCAGCTGCCCAACGAAGTGAACGCCGCCTTCCCCCTGGAACGGCCCGACTGGGACTACACCACCACCGAGGGCCGGAACCACCTGGTGCTGTACAGACAGCTGCTGCTGGCTGGCCTGCAGAATGCCGGCAGAAGCCCCACCAACCTGGCCAAAGTGAAGGGCATCACCCAGGGCCCCAACGAGAGCCCCAGCGCCTTCCTGGAAAGACTGAAAGAGGCCTACCGGCGGTACACCCCCTACGATCCTGAGGACCCTGGCCAAGAAACAAACGTGTCCATGAGCTTCATCTGGCAGAGCGCCCCTGACATCGGCCGGAAGCTGGAACGGCTGGAAGATCTGAAGTCCAAGACCCTGGGGGACCTCGTGCGCGAGGCCGAGAAGATCTTCAACAAGAGAGAGACACCCGAGGAACGGGAAGAGAGAATCCGGCGCGAGATCGAGGAAAAAGAGGAACGGCGCAGAGCCGAGGACGAGCAGAGAGAGCGCGAGAGAGACAGACGGCGGCACAGAGAGATGAGCAAGCTGCTGGCCACCGTGGTCATCGGCCAGCGGCAGGATAGACAGGGCGGCGAGAGAAGAAGGCCCCAGCTGGACAAGGACCAGTGCGCCTACTGCAAAGAGAAGGGCCACTGGGCCAAGGACTGCCCCAAGAAGCCCAGAGGACCTAGGGGCCCTAGACCTCAGACCAGCCTGCTGACACTGGGCGATTGA-3′ |