Skip to main content

Table 1 DNA oligonucleotides used in this work

From: A functional conserved intronic G run in HIV-1 intron 3 is critical to counteract APOBEC3G-mediated host restriction

Primer

Primer sequence

#0640

5′- CAATACTACT TCTTGTGGGT TGG

#1544

5′- CTTGAAAGCG AAAGTAAAGC

#2330

5′- TCTGGATCCA CCACCACCAC CGTAGAT

#2339

5′- TGGGAGCTCT CTGGCTAACT AGGGAACCCACTGCTTAAGC

#3153

5′- CCACTCCTCC ACCTTTGAC

#3154

5′- ACCCTGTTGC TGTAGCCA

#3387

5′- TTGCTCAATG CCACAGCCAT

#3388

5′- TTTGACCACT TGCCACCCAT

#3389

5′- TTCTTCAGAG CAGACCAGAG C

#3390

5′- GCTGCCAAAG AGTGATCTGA

#3391

5′- TCTATCAAAG CAACCCACCTC

#3392

5′- CGTCCCAGAT AAGTGCTAAGG

#3395

5′- GGCGACTGGG ACAGCA

#3396

5′- CCTGTCTACT TGCCACAC

#3397

5′- CGGCGACTGA ATCTGCTAT

#3398

5′- CCTAACACTA GGCAAAGGTG

#3631

5′- CGGCGACTGA ATTGGGTGT

#3632

5′- TGGATGCTTC CAGGGCTC

#3633

5′- CGACACCCAA TTCTTGTTAT GTC

#3636

5′- CCGCTTCTTC CTTGTTATGT C

#3896

5′- TTCACTCTTA AGTTCCTCTA AAAGCTCTAG TGTCCATTCA TTGTATGGCT CTCTCTGTGG CCCTTGGTCT TCTG

#3897

5′- GTTGCAGAAT TCTTATTATG GCTTCCACTC CTGCCCAAGT ATCGCCGTAA GTTTCATAGA TATGTTGTCC TAAGTTATG

#4324

5′- TAATACGACT CACTATAGG

#4355

5′- TTCATCGAAT TCAGTGCCAA GAAGAAAAGC AAAGATCA

#4614

5′- TTCATTGTAT GGCTCCCTCT GTGGCCCTTG ACATGGGTGA TCCTCATGTC CTATAGTGAG TCGTATTA

#4615

5′- TTCATTGTAT GGCTCTCTCT GTGGCCCTTG ACATGGGTGA TCCTCATGTC CTATAGTGAG TCGTATTA

#4718

5′- TAGTGTCCAT TCATTGTATG GCTCCCTCTG TGGCCCCTGG T

#4720

5′- TAGTGTCCAT TCATTGTATG GCTCTCTCTG TGGCCCCTGG T

#4843

5′- CCGCTTCTTC CTTTCCAGAG G

#4849

5′- CCTCTGGAAA GAATTGGGT

vifmut-forward

5′- AGGGCCACAG AGAGAGCCAT ACAATG

vifmut-reverse

5′- CATTGTATGG CTCTCTCTGT GGCCCT