Table 3 Genotypic prediction of HIV-1 tropism by a subtype D specific algorithm compared to the observed phenotype
TTT | Concordance | Genotypic Prediction | ||||
|---|---|---|---|---|---|---|
Genotypic tool | R5 | R5X4/X4 | Sena | Speb | ||
Combined 11/25 and net charge rules for subtype D | R5 | 21 | 1 | 92% | 75% | 95% |
X4 | 1 | 3 | κ = 0.70 (p < 0.001) | |||