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Figure 1 | Retrovirology

Figure 1

From: Conformational alterations in the CD4 binding cavity of HIV-1 gp120 influencing gp120-CD4 interactions and fusogenicity of HIV-1 envelopes derived from brain and other tissues

Figure 1

Phylogenetic analysis of env nucleotide sequences. The phylogenetic tree was constructed from an env nucleotide multiple sequence alignment using a maximum likelihood algorithm, as described previously [39]. The nucleotide sequences of HIV-1 AD8, 89.6, JRCSF, YU2, NL4-3 and HXB2 env genes were included for comparison. Numbers associated with each branch are bootstrap values obtained from 1000 replicates. Only values above 700 for the major branches are shown. Branch lengths are proportional to the amount of sequence divergence.

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