Table 4 Number of enriched gene sets in pairwise comparisons for CD4+ and CD8+ T cells using gene set enrichment analysis (at level of FDR < 0.05 and FDR < 0.1)
FDR < 0.05 | CD4 | CD8 | CD4 and CD8 | |||
|---|---|---|---|---|---|---|
Enriched gene sets | up | down | up | down | up | down |
VIRvsBDL | 19 | 3 | 29 | 2 | 5 | 2 |
VIRvsLTNP | 27 | 2 | 8 | 0 | 6 | 0 |
BDLvsLTNP | 20 | 7 | 0 | 1 | 0 | 1 |
FDR < 0.1 | CD4 | CD8 | CD4 and CD8 | |||
Enriched gene sets | up | down | up | down | up | down |
VIRvsBDL | 57 | 3 | 53 | 2 | 18 | 2 |
VIRvsLTNP | 51 | 4 | 20 | 0 | 13 | 0 |
BDLvsLTNP | 31 | 34 | 0 | 5 | 0 | 3 |