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Table 2 Most representated protein motifs in the Tat interactome dataset.

From: In vitro nuclear interactome of the HIV-1 Tat protein

Motif

N Dataset

% Dataset

% Nucleus

RRM

16

8.4

6.3

HELIC

16

8.4

4.4

DEXDc

16

8.4

3.8

AAA

12

6.3

1.4

BROMO

10

5.2

1.5

HMG

10

5.2

1.9

SANT

8

4.2

1.4

WD40

7

3.7

3.4

PHD

5

2.6

3.2

DSRM

5

2.6

0.7

  1. The number of appearance and percentage of each of the motifs are shown. N Dataset: Number of proteins in Tat interactome dataset possessing motif annotation. % Dataset: percentage of proteins in Tat interactome dataset possessing motif annotation. % Nucleus: percentage of proteins in Nuclear Protein Database (NPD) possessing motif annotation.
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Retrovirology

ISSN: 1742-4690

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