Table 2 Comparison of the tropism (co-receptor usage), net charges and sequences of the gp120 V3 loops of CRF07_BC and sub-type B' viruses
HIV-1 | Subtype | Tro- | V3 sequence* | |
|---|---|---|---|---|
isolate | Â | pism | Net charge | 11 tip 25 |
XJDC1353 | CRF07_BC | R5 | 4 | CIRP NNNTR K S VRI~~ GPGQ TFYATG D IIG DIRKAYC |
XJDC6371 | CRF07_BC | R5 | 4 | CTRP NNNTR K S IRI~~ GPGQ TFYATG E IIG NIRQAYC |
XJDC0793 | CRF07_BC | R5 | 3 | CTRPNNNTR K SIRI~~GPGQ TFYATGEIIG DIRQAHC |
XJDC0015 | CRF07_BC | R5 | 3 | CTRPNNNTR K SIRI~~GPGQ TFYATGDIIG DIRQAHC |
CBJB105 | CRF07_BC | R5 | 3 | CTRPNNNTR K SIRI~~GPGQ TFYATGEIIG DIRQAHC |
XJDC6431 | CRF07_BC | R5 | 3 | CTRP NNNTR K S IRI~~ GPGQ TFYATG E IIG DIRQAYC |
XJN0135 | CRF07_BC | R5 | 3 | CTRP NNNTR K S IRI~~ GPGQ TFYATG D IIG DIRQAHC |
CBJB257 | CRF07_BC | R5 | 3 | CTRPNNNTR K SIRI~~GPGQ AFYATGDIIG DIRQAHC |
CBJB256 | CRF07_BC | R5 | 3 | CTRP NNNTR K S IRI~~ GPGQ TFYATG E VIG DIRQAFC |
XJDC6331 | CRF07_BC | R5 | 3 | CTRPNNNTR K SIRI~~GPGQ TFYAHGEIIG DIRQAYC |
XJDC6291 | CRF07_BC | R5 | 3 | CTRPGNNTRK SIRI~~GPGQ TFYATGDIIG DIRQAHC |
XJDC1981 | CRF07_BC | R5 | 3 | CTRP NNNTR K S IRI~~ GPGQ TFYATG D IIG DIRQAHC |
SHXDC148 | B' | R5 | 4 | CTRPTTNTRK SIPL~~GPGR AWYATGPIIG DIRQAHC |
SHXDC168 | B' | R5/X4 | 4 | CTRPNNNTR K SINI~~GPGQ ALYATGQIIG NIRQAHC |
SHXDC162 | B' | R5/X4 | 4 | CTRPNNNTR K SIP.~~GPGR AWYTTGQIIG DIRQAHC |
20100311 | B' | R5/X4 | 5 | CTRP NNNTR K R VTL~~ GPGR VWYTTG Q IVG DIRQAHC |
20201188 | B' | R5/X4 | 5 | CTRPNNNTR N RFSI~~GPGR AWIATRQIIG DIRQAHC |
20101324 | B' | R5/X4 | 5 | CTRP NNNTR K R VTL~~ GPGR VWYTTG Q IIG DIRKAHC |
20101810 | B' | R5/X4 | 4 | CTRPNNNTR K SINL~~GPGR AWYTTGQIF. DIRQAHC |
20100374 | B' | R5/X4 | 6 | CTRP NNNTR K R VTL~~ GPGR VWYTTG Q IIG DVRRAHC |
20101796 | B' | R5/X4 | 3 | CTRPNNNTIK SISL~~GPGK AWYTTGQIIG DIRQAHC |
20100141 | B' | R5 | 4 | CTRPNNNTR K SIPI~~GPGR AWYATGQIIG DIRQAHC |
20100419 | B' | R5 | 4 | CTRP NNNTR K S IHL~~ GPGR AWFATG E IIG NIRQAHC |
20200407 | B' | R5 | 5 | CTRPNNNTSK GIRI~~GPGR AWYATERIVG DIRQAHC |
20200084 | B' | R5 | 3 | CIRPNNNTR K SITL~~GPGK AWYTTGEIIG DIRQAHC |
20100687 | B' | R5 | 4 | CIRP NNNTR K S IHL~~ GPGK AWYTTG Q IIG DIRQAHC |
20200068 | B' | R5 | 3 | CIRP NNNTR K S IHL~~ GPGQ AWYTTG Q IIG DIRQAHC |
20200092 | B' | R5 | 4 | CTRP NNNTR K S IPL~~ GPGK AWYTTG Q IIG EIRQAHC |
20200259 | B' | R5 | 4 | CTRP NNNTR K S IPL~~ GPGK AWYTTG Q IIG DIRQAHC |
20200079 | B' | R5 | 4 | CTRPNNNTR K GIPL~~GPGR AWYATGQIIG DIRQAHC |
20200108 | B' | R5 | 4 | CTRPNNNTR K SINL~~GPGR AWYATGQIIG EIRQAHC |
20100096 | B' | R5 | 4 | CTRP NNNTR K S IHL~~ GPGR AWYTTG Q IIG DIRQAHC |