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Table 1 Sequences of the region surrounding the CypA binding Loop in CA*

From: Modulation of HIV-1 infectivity and cyclophilin A-dependence by Gag sequence and target cell type

Virus

Position and Sequence

--- CypA Binding Loop ---

 

80

81

82

83

84

85

86

87

88

89

90

91

92

93

94

95

96

97

98

99

100

NL4-3

W

D

R

L

H

P

V

H

A

G

P

I

A

P

G

Q

M

R

E

P

R

NRC1

.

.

.

.

.

.

A

Q

.

.

.

V

.

.

.

.

L

.

.

.

.

NRC2

.

.

.

.

.

.

.

.

.

.

.

V

.

.

.

.

.

.

.

.

.

NRC3-1

.

.

.

V

.

.

.

.

.

.

.

.

.

.

.

.

.

.

.

.

.

NRC3-5

.

.

.

V

.

.

.

.

.

.

.

.

.

.

.

.

.

.

.

.

.

NRC9

.

.

.

.

.

.

A

.

.

.

.

V

.

.

.

.

.

.

.

.

.

NRC10

.

.

.

.

.

.

A

.

.

.

.

.

.

.

.

.

I

.

.

.

.

  1. *Numbers indicate the amino acid position in the CA protein. The CypA binding loop is indicated in italics [19]. The amino acid sequence for NL4-3 is given in single letter code. Only amino acids that differ from the NL4-3 sequence are shown for the other viruses.
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