From: The strength of the HIV-1 3' splice sites affects Rev function
Oligo no. | sequence |
---|---|
#139 | 5'-CCCAAGCTTTCTAGACTCGAGCTACAAAATCCTTTC |
#377 | 5'-CTGAAGCGCGCACGGCAAGAGGCGAGGGGAGGCGACTG |
#480 | 5'-GCGCGCTTCAGCAAGC |
#481 | 5'-GCGCGCACGGCAAGA |
#559 | 5'-CTTTACGATGCCATTGGGA |
#626 | 5'-TGTCTTAAGTATAGTGAATCGCGTTCGCCAAGGATACTCACCA |
#628 | 5'-CCCCTCGGGATTGGGAGGTGGGTTTGGAAGCTTAGTGGTGAGTATCC |
#796 | 5'-TGAGGTTACCGTTCTTTCTATT |
#797 | 5'-GATCCCGGGATCCTCGGGATTGGGAGGTGGGTCTGAAAAGAAAGAGGAGAATAACCTTGACGAACACGGTTAGCAATAGAAAGAAC |
#798 | 5'-TGAACTAGTAGGTTTAAGAATAGTTTTTGCTGTTCTTTCTATT |
#800 | 5'-TGAGGTTACCGTACTTTCTATAGTGAAT |
#918 | 5'-GCTATGTCGACAAGGAGCTGCAGATCGATGAATTCGATACTTACCAGTCGCCTCCCCTC |
#931 | 5'-GCTATGTCGACACCCAATTCTGAAACGATAATGGTGAATATCCCTGCCTAACTCTATTCACTATA |
#932 | 5'-ATCCTGCAGAATAGTTTTTGCTGTACTTTCTATAGTGA |
#936 | 5'-ACTGGTTACCACATATCTATGAAACT |
#939 | 5'-ACAGGATCCATCCCCGGGCTGAAATGGATAAACA |
#940 | 5'-ACTGGTTACCTGTACCAATTGCTATT |
#941 | 5'-ACAGGATCCATCCCCGGGCTAAGGCTTTTGTCAT |
#942 | 5'-ACTGGTTACCAAAAAGTGTTGCTTTC |
#943 | 5'-ACAGGATCCATCCCCGGGCTGCCATAGGAGATGC |
#945 | 5'-ACAGGATCCATCCCCGGGCTGAAAAACAGTCAAA |
#946 | 5'-ACTGGTTACCACCCTGAATTAGCAGA |
#947 | 5'-ACAGGATCCATCCCCGGGCTGTAATAAACCCGAA |
#948 | 5'-ACTGGTTACCTAGCAACAGACATACA |
#985 | 5'-GATGGATCCCGGGCTCGGGATTGGGAG |
#986 | 5'-TGAGGTTACCGTCTTAAGTATA |
#1065 | 5'-ATCCCCGGGCTGAAACGATAATGGTGA |
#1088 | 5'-ACAGGATCCATCCCCGGGTGCTTTGATAGAGAAG |
#1089 | 5'-ACAGGATCCATCCCCGGGCTTTCCAGAGGAGCTT |
#1091 | 5'-ACAGGATCCATCCCCGGGCTTGTTATGTCCTGCT |
#1183 | 5'-CTAGAATTCAGCAACAGACATACA |
#1224 | 5'-TCTTCCAGCCTCCCATCAGCGTTTGG |
#1225 | 5'-CAACAGAAATCCAACCTAGAGCTGCT |
#1388 | 5'-TGAGGTTACCAAAAAGTGTTGCTTTCATTGCCACGTTTGTTTCATGAC |
#1389 | 5'-ATCCCCGGGCTGAAAGAGGAGAAGGCGAGGGCGTTTGTCATGAAAC |
#1481 | 5'-ATCCCCGGGCTGAAAGAGGAGAAGGCTAGGGCTTTTGTCATGAAAC |
#1482 | 5'-TGAGGTTACCAAAAAGTGTGGCGTCCGTTGCCACGTTTGTTTCATGAC |
#1483 | 5'-ATCCCCGGGCTGCCATAGGAGATGCCGAAGGCGTTTGTCATGAAAC |
#1484 | 5'-ATCCCCGGGCTGCCATAGGAGATGCCGAAGGCGTTTGTTAGTAAAC |
#1486 | 5'-ATCCCCGGGCTGAAATAGGAGATGCCTAAGGCTTTTGTCATGAAAC |
#1492 | 5'-ACAGGATCCATCCCCGGGAGGGCTCTAGTCTAGG |
#1542 | 5'-CACCTTCTTCTTCTATTCCTT |
#1544 | 5'-CTTGAAAGCGAAAGTAAAGC |
#1586 | 5'-TGAGGTTACCAAAAAGTGTGGCGTCCGTTGCCACGTTTGTTTACTAAC |
#1587 | 5'-ATCCCCGGGCTGAAAGAGGAGAAGGCGAGGGCGTTTGTTAGTAAAC |
#1590 | 5'-ATCCCCGGGCTGAAAGAGGAGAAGGCGAGGGCGTTTGTCATGAAAC |
#1591 | 5'-TGAGGTTACCAAAAAGTGTTGCTTTCATTGCCACGTTTGTTTCATGAC |
#1592 | 5'-ATCCCCGGGCTGAAATAGGAGATGCCGAAGGCGTTTGTTAGTAAAC |
#1913 | 5'-TACTGCAGTACTTTTATGTCACTATTATCTTGTATTACTACTGCCCCTTCACCTTTCCAGAGGAGCTTTGCTG |
#1913a | 5'-CTACTGCAGTACTTTTATGTCACTATTATCTTGTATTACTACTGCCCCTTCACCTTTCCAGAGGAGCTTTGCTGGTCGATAGCAAACTGGATCTCTG |
#1913b | 5'-CTACTGCAGTACTTTTATGTCACTATTATCTTGTATTACTACTGCCCCTTCACGATAGCAGAGGAGCTTTGCTG |
#2183 | 5'-GGTCAGGGTCTACTTGTGTGC |
#2335 | 5'-GGGTCTCTCTGGTTAGACCAG |