Figure 3
From: Molecular characterization of the HIV-1 gagnucleocapsid gene associated with vertical transmission
Multiple sequence alignment of deduced amino acids of NC and p6 from mother-infant pairs D and E. Within the alignment, the top sequence is the NC consensus B (ConBNC) sequence to which the mother-infant pair sequences are compared. Each line of the alignment represents one clone sequence, and is identified by a clone number with M referring to mother and I referring to infants. The dots represent agreement with the consensus sequence, while substitutions are represented by a single letter amino acid code. Stop codons are shown as asterisks (*). The functional domains within the sequence are indicated above the alignment.