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Table 2 Parameter estimates and log likelihoods under different clock models

From: Role of viral evolutionary rate in HIV-1 disease progression in a linked cohort

Model p Log L Evolutionary rate
Different Rates 34 -24119 n.a.
Global clock 21 -24218 ABC: 2.928 × l0-3 (± 0.72 × l0-3)
Local clock for A and (BC) 22 -24164 A: 1.308 × l0-3 (± 0.19 × 10-3), BC: 5.08810-3 (± 0.41 × 10-3)
Local clock for A, B and C 23 -24156 A: 1.008 × l0-3 (± 0.16 × 10-3), B: 1.2 × l0-2 (± 1.86 × 10-3), C: 4.8 × l0-3 (± 0.38 × 10-3)
  1. pThe amount of parameters used in the model.
  2. LogLThe log likelihoods.