Skip to main content

Table 1 Betaretroviral elements in mega- and microbat transcriptomes

From: Identification of diverse full-length endogenous betaretroviruses in megabats and microbats

   

P. alecto

R. megaphyllus

R. ferrumequinum

   

Lowest a

# Hits b

Lowest

# Hits

Lowest

# Hits

   

e-value

 

e-value

 

e-value

 

Betaretroviruses

JSRV

Gag

1.65×10-121

150

3.86×10-28

9

ND

0

 

Pol

<1×10-250

246

7.80×10-36

16

1.0×10-58

1

 

Env

1.29×10-51

48

4.00×10-15

3

ND

0

SMR

Gag

1.75×10-59

185

1.31×10-15

3

ND

0

 

Pol

<1×10-250

241

2.13×10-40

5

7.0×10-56

1

 

Env

2.58×10-31

137

2.65×10-31

2

1.0×10-87

1

MPMV

Gag

2.16×10-104

190

1.49×10-20

5

ND

0

 

Pol

<1×10-250

287

7.71×10-34

21

1.0×10-58

1

 

Env

1.83×10-33

140

1.48×10-31

6

2.0×10-98

1

MMTV

Gag

6.85×10-53

90

4.82×10-13

2

ND

0

 

Pol

<1×10-250

269

1.36×10-31

15

2.0×10-45

1

 

Env

8.39×10-54

19

ND

0

ND

0

SRV

Gag

1.70×10-108

185

2.96×10-20

5

ND

0

 

Pol

<1×10-250

290

9.34×10-39

21

9.0×10-62

1

  

Env

1.31×10-35

136

2.75×10-26

2

1.0×10-109

1

  1. aGag, Pol, and Env proteins were translated from the genomes of extant betaretroviruses and used as search queries in a tBLASTn analysis of the Illumina sequenced transcriptome of P. alecto, and the 454 sequenced transcriptomes of R. megaphyllus, and R. ferrumequinum. The e-value of the transcriptome hit with the greatest sequence similarity (lowest e-value) to each query sequence is displayed.
  2. bThe number of transcripts identified in the transcriptomes with an e-value < 1 × 10-10. ND: No data.
Back to article page

Retrovirology

ISSN: 1742-4690

Contact us