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Table 3 Distribution of errors per sequence

From: Analysis of 454 sequencing error rate, error sources, and artifact recombination for detection of Low-frequency drug resistance mutations in HIV-1 DNA

Sample (total sequences)

0 errors

1 errors

2 errors

3 errors

4 errors

5 errors

6–10 errors

>10 errors

All sequences with errors

Run1MID1 (8305)

24.23%

44.32%

18.62%

8.04%

3.05%

1.01%

.067%

0.06%

6293 (75.77%)

Run1MID2 (43699)

25.50%

14.47%

36.56%

15.79%

4.68%

1.53%

1.42%

0.05%

32556 (74.50%)

Run1MID3 (24210)

67.16%

24.51%

5.03%

1.62%

0.85%

0.43%

0.40%

0.02%

7951 (32.84%0

Run1MID4 (13466)

69.69%

22.70%

4.60%

1.45%

0.63%

0.40%

0.52%

0.00%

4081 (30.31%)

Run2MID1 (48825)

23.23%

43.26%

20.37%

7.09%

2.59%

1.27%

1.80%

0.40%

37483 (76.77%)

Run2MID2 (98785)

0.12%

65.26%

23.88%

6.17%

2.33%

0.96%

1.08%

0.20%

95665 (99.88%)

Run2MID3 (60477)

66.18%

23.57%

5.90%

1.96%

0.79%

0.51%

0.98%

0.09%

20451 (33.82%)

Run2MID4 (38970)

60.18%

26.66%

7.64%

2.42%

1.03%

0.70%

1.27%

0.12%

15517 (39.82%)

Number of sequences (336737)

113740

129224

59438

19843

7031

3056

3875

526

222997 (66.22%)

Percentage in all sequences

33.78%

38.38%

17.65%

5.89%

2.09%

0.91%

1.15%

0.16%

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