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Table 2 Selected genes downregulated in Th1Th17 vs. Th1

From: Transcriptional profiling reveals molecular signatures associated with HIV permissiveness in Th1Th17 cells and identifies Peroxisome Proliferator-Activated Receptor Gammaas an intrinsic negative regulator of viral replication

Gene symbol

Fold change Th1Th17/Th1

p-value

Gene title

XCL1

−7,53

0,001

Chemokine (C motif) ligand 1

IL5

−3,35

0,010

Interleukin 5 (colony-stimulating factor, eosinophil)

KLRK1

−2,66

0,003

Killer cell lectin-like receptor subfamily K, member 1

LAIR2

−2,57

0,004

Leukocyte-associated immunoglobulin-like receptor 2

IL4

−2,47

0,013

Interleukin 4

TIGIT

−2,36

0,001

T cell immunoreceptor with Ig and ITIM domains

CDH1

−2,35

0,000

Cadherin 1, type 1, E-cadherin (epithelial)

IL17RB

−2,33

0,005

Interleukin 17 receptor B

CXCL10

−2,31

0,046

Chemokine (C-X-C motif) ligand 10

FCRL3

−2,30

0,048

Fc receptor-like 3

IL-17RB

−2,19

0,003

Interleukin 17 receptor B

SLAMF7

−2,08

0,027

SLAM family member 7

PTK2

−2,01

0,000

PTK2 protein tyrosine kinase 2

CXCR5

−2,00

0,013

Chemokine (C-X-C motif) receptor 5

ZNF80

−1,96

0,008

Zinc finger protein 80

CADM1

−1,89

0,037

Cell adhesion molecule 1

CD109

−1,84

0,034

CD109 molecule

SERPINB6

−1,80

0,003

Serpin peptidase inhibitor, clade B, member 6

PECAM1

−1,76

0,004

Platelet/endothelial cell adhesion molecule

NFIA

−1,64

0,009

Nuclear factor I/A

TIAM2

−1,64

0,008

T-cell lymphoma invasion and metastasis 2

BCL2L14

−1,63

0,032

BCL2-like 14 (apoptosis facilitator)

ACPL2

−1,58

0,013

Acid phosphatase-like 2

IFI27

−1,57

0,026

Interferon, alpha-inducible protein 27

CCL17

−1,54

0,019

Chemokine (C-C motif) ligand 17

ALCAM

−1,54

0,009

Activated leukocyte cell adhesion molecule

H1F0

−1,50

0,020

H1 histone family, member 0

PLA2G4A

−1,49

0,030

Phospholipase A2, group IVA

HTATIP2

−1,49

0,034

HIV-1 Tat interactive protein 2, 30 kDa

SMAD2

−1,48

0,027

SMAD family member 2

ISYNA1

−1,48

0,026

Inositol-3-phosphate synthase 1

ZNF827

−1,47

0,030

Zinc finger protein 827

TAF15

−1,47

0,040

TBP-associated factor RNA polymerase II

GATA3

−1,46

0,015

GATA binding protein 3

HLA-DOA

−1,42

0,032

Major histocompatibility complex, class II, DO alpha

ZNF642

−1,40

0,025

Zinc finger protein 642

GRK5

−1,39

0,041

G protein-coupled receptor kinase 5

ZNF167

−1,38

0,022

Zinc finger protein 167

AARS

−1,37

0,021

Alanyl-tRNA synthetase

MARS

−1,36

0,041

Methionyl-tRNA synthetase

ZNF107

−1,35

0,031

Zinc finger protein 107

ZNF443

−1,35

0,022

Zinc finger protein 443

  1. Shown are 42 differentially expressed genes (p-value <0.05 and cut-off 1.3 fold) that are downregulated in Th1Th17 vs. Th1 cells.