Table 3 The pairwise AA diversity of gag domains in 8 HIV-1 subtypes and CRFs (%)
From: Functional conservation of HIV-1 Gag: implications for rational drug design
| Â | Matrix | Capsid | p2 | NC | p1 | p6 | Gag |
|---|---|---|---|---|---|---|---|
B | 12.36 | 4.56 | 20.65 | 10.31 | 4.77 | 15.74 | 8.84 |
A1 | 10.69 | 5.46 | 13.97 | 4.75 | 5.60 | 17.17 | 8.18 |
C | 14.77 | 5.77 | 23.79 | 9.79 | 4.80 | 15.83 | 9.96 |
D | 12.74 | 4.87 | 25.62 | 9.43 | 8.89 | 10.17 | 8.68 |
F1 | 12.71 | 5.37 | 29.24 | 9.00 | 6.71 | 15.32 | 9.32 |
G | 17.51 | 6.15 | 16.06 | 10.53 | 8.42 | 13.90 | 10.71 |
01_AE | 11.36 | 3.44 | 24.36 | 4.95 | 7.74 | 14.07 | 7.46 |
02_AG | 13.67 | 4.91 | 18.50 | 3.31 | 5.39 | 14.39 | 8.35 |
Mean | 13.17±2.01 | 5.04±0.79 | 21.49±4.83 | 7.92±2.77 | 6.39±1.60 | 14.70±1.99 | 9.02±1.09 |