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Table 2 The inter- and intra-subtype diversity of gag AA sequences in 8 HIV-1 subtypes and CRFs (%)

From: Functional conservation of HIV-1 Gag: implications for rational drug design

 

Subtype

B

A1

C

D

F1

G

01_AE

02_AG

Intra-subtype

 

8.96

8.34

9.89

8.91

9.45

10.90

7.58

8.26

Inter-subtype

B

 

17.54

18.38

12.70

16.52

18.46

17.22

18.61

A1

  

17.65

16.73

16.93

17.27

12.71

14.69

C

   

16.67

17.21

18.02

18.22

19.59

D

    

16.55

17.56

16.85

18.72

F1

     

15.93

16.48

17.68

G

      

17.70

18.81

01_AE

       

14.92