From: Disease-associated XMRV sequences are consistent with laboratory contamination
Mouse strain | Taqman PCR result (Ct FAM) | |||||
---|---|---|---|---|---|---|
Name | Jackson ID | 454 deep sequencing | XMRV - gag-leader | XMRV - int | MLV-X - gag | |
Read depth | (%) | Ct | Ct | Ct | ||
Inbred | ||||||
129X1/SvJ | 000691 | 64706 | 0.73 | 28 | > 41 | 21 |
Balb/cJ | 000651 | 32512 | 0.62 | 31 | > 41 | 23 |
C57BL/6J | 000664 | 39548 | 0 | 27 | > 41 | 20 |
C57BR/cdJ | 000667 | 29280 | 0 | 27 | 21 | 21 |
CBA/J | 000656 | 20548 | 0.77 | 27 | 39 | 21 |
DBA/1J | 000670 | 63559 | 0 | 28 | 35 | 20 |
I/LnJ | 000674 | 8012 | 0 | 28 | 38 | 20 |
LPT/LeJ | 000220 | 10303 | 0.64 | 28 | > 41 | 22 |
NZW/LacJ | 001058 | 11644 | 0 | 29 | 21 | 20 |
Wild-derived inbred | ||||||
PWK/PhJ | 003715 | 9457 | 0 | 29 | 38 | 19 |
WMP/PasDnJ | 001746 | 19294 | 0 | 28 | 36 | 22 |
WSB/EiJ | 001145 | 14062 | 0 | 38 | 38 | 22 |