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Table 4 dN/dS values in HIV-1 RT sequences within mother sets and within infant sets.

From: Conservation of functional domains and limited heterogeneity of HIV-1 reverse transcriptase gene following vertical transmission

MOTHER

INFANT

 

N

P1

P2

P3

dN/dS

 

N

P1

P2

P3

dN/dS

Mother B

12

53

18.8

27

8.9

Infant B

12

41

42

16

3.31

Mother C

12

55.5

43

1.3

6.09

Infant C

13

0

81.2

18.8

0.01

Mother D

11

70.6

5.7

23.6

2.52

Infant D

10

74.8

19.2

5.9

4.44

Mother F

14

81.7

7.8

10.4

2.67

Infant F

12

0

100

0

0.001

Mother H

14

72

0

27

2.34

Infant H1

11

47

50

2.8

14.04

      

Infant H2

11

56

42

0.6

16.58

Totals

 

66.5

15.1

18.4

4.50

 

69

36.5

55.7

7.8

6.39

  1. N – number of RT clones sequenced.; P1 = proportion of conserved codons as a percent; P2 = proportion of neutral codons as a percent; P3 = proportion of positively selected codons as a percent. dN/dS = ratio of synonymous to non-synonymous at P3 sites. Totals were calculates as an average of all values.