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Table 4 Steady state kinetic parameters for EFdA-TP and dATP incorporation by WT and K65R HIV-1 RTs

From: Hypersusceptibility mechanism of Tenofovir-resistant HIV to EFdA

Enzyme

dNTP

K m (μM)

kcat(min-1)

kcat/K m (min-1 · μM-1)

Selectivitya

Fold changeb

T d26 /P d18-P5

      

WT RT

dATP

2.38 ± 0.27

1.58 ± 0.12

0.66

1

1

 

EFdA-TP

0.66 ± 0.04

3.26 ± 0.42

4.94

7.5

K65R RT

dATP

5.99 ± 0.81

0.92 ± 0.14

0.15

1

0.8

 

EFdA-TP

1.83 ± 0.34

1.74 ± 0.42

0.95

6.3

T d31 /P d18-P0

      

WT RT

dATP

0.33 ± 0.07

6.32 ± 0.14

19.15

1

1

 

EFdA-TP

0.23 ± 0.01

4.73 ± 0.33

20.57

1.1

K65R RT

dATP

0.42 ± 0.01

3.62 ± 0.71

8.62

1

1

 

EFdA-TP

0.31 ± 0.02

3.07 ± 0.15

9.90

1.1

T d31A /P d21

      

WT RT

dATP

0.37 ± 0.08

3.64 ± 0.57

9.84

1

1

 

EFdA-TP

0.19 ± 0.06

3.54 ± 0.44

18.63

1.9

K65R RT

dATP

1.06 ± 0.11

3.68 ± 0.28

3.47

1

0.9

 

EFdA-TP

0.53 ± 0.05

3.38 ± 0.29

6.38

1.8

 
  1. Values are mean ± S.D. of two to four independent experiments and were determined from Michaelis-Menten equation using GraphPad Prism 4.
  2. aSelectivity is the ratio of the incorporation efficiency (kcat/K m ) of EFdA-TP over that of dATP ([kcat/K m ]EFdA-TP / [kcat/K m ]dATP).
  3. bFold Change is the ratio of the selectivity in K65R over the selectivity in WT RT.